Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq397970 322 4e-83
seq273439 174 1e-38
seq397969 140 2e-28
>seq397970
Length=5258
Score = 322 bits (356), Expect = 4e-83
Identities = 484/688 (70%), Gaps = 5/688 (1%)
Strand=Plus/Minus
Query 27104 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 27163
|||| || || || || || | || |||||| | |||||| | || | ||||| |||||
Sbjct 2282 TGGGGAAAGGCCTTGGTTCTCGCTGAAGCTGAATTTTCAGCAGCTCAATGTGATTCAGGT 2223
Query 27164 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223
| | ||| || ||||||| ||||| ||||| || || || | || || |||| ||| |
Sbjct 2222 AAATGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGTG 2163
Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283
| |||||||| | || | ||||||||||||||| ||||| || || || ||||| |
Sbjct 2162 CGATCATGTA-----GCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCCATAT 2108
Query 27284 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATA 27343
| || ||||||||||| ||||| || || ||||| || | ||||| ||||| || |
Sbjct 2107 CTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCAAA 2048
Query 27344 TGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGA 27403
|||||||||||| || || |||||||| | ||||| || ||||| || |||| ||
Sbjct 2047 GGGCGTGGCACGGGGGTAGGGCCATGAGAGGGAGATCTTTTGGATTCCAAGCACACAGGA 1988
Query 27404 TGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCA 27463
|||| | ||||| || |||||| | |||| ||| | |||||||| ||||| |
Sbjct 1987 TGATTCTTCTGTCGTCAGGGTTGGTTTTGATTGTGTCAGTCACTTTTTGCAGTTGATCTA 1928
Query 27464 CCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATT 27523
| || | || || ||| ||| || |||| || || || ||||||||||| |
Sbjct 1927 CTCCTTGATCTGAATAATCTGAATCCATATCTTTGTATTCGGCCCCAAAATGCCTCCACT 1868
Query 27524 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 27583
| || || || || || || | || || ||| | ||| ||| ||| ||||||
Sbjct 1867 GAAAGCCATAAACTGGGCCTAAATCCCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCA 1808
Query 27584 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGG 27643
| ||||||| ||| || ||||| |||||||| || || ||||| || ||||| || |
Sbjct 1807 AGAAGTCTCGGGACCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAG 1748
Query 27644 AGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCC 27703
||||||||| || ||| |||||||||| ||||||| || |||| || || || |
Sbjct 1747 CGTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCGAAACACCCTTGCAGAAAACAC 1688
Query 27704 TCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAACA 27763
||||| || || || ||||| | | | |||| ||| | ||||| || ||||
Sbjct 1687 GTTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCGCGCCTGCATGCCGAACA 1628
Query 27764 CGGACAAGACTCCCGTGCCCGTCCTGTC 27791
| |||| | || |||||||| | |||
Sbjct 1627 CCGACAGGGTGCCGGTGCCCGTGCGGTC 1600
>seq273439
Length=4507
Score = 174 bits (192), Expect = 1e-38
Identities = 389/572 (68%), Gaps = 19/572 (3%)
Strand=Plus/Minus
Query 27104 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 27163
||||||||| || || || | || ||||| | |||||| | || | |||||||||||
Sbjct 2455 TGGGAAAGGC-CTTGGTTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCCAGGT 2397
Query 27164 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223
| | ||| || ||||||| ||||| ||| | || || || | || || |||| ||| |
Sbjct 2396 AAATGTGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2337
Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283
| |||||||| ||||| || | |||||||||| ||| |||| || || || ||| |||
Sbjct 2336 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGACGTTGAAGGACACACCCAGGCCCCTGT 2277
Query 27284 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC-TCCATCGCTTACGTAAAACTGACAT 27342
| || ||||||||||| ||||| || || ||||| | || | ||||| || || ||
Sbjct 2276 CTCCTGACCTCTGGTACAGCTG-CAGGACAGCTCATGGTTCAC-CACGTAGAAGTGGCAA 2219
Query 27343 ATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACAC 27401
| ||| |||| | | | || |||| ||| ||||| | ||||| || || |
Sbjct 2218 AGGGC--GGCA--GGGTATGA-----GAGG---AAGATCTTT-TGATTCCAAGCACATAG 2172
Query 27402 GATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATC 27461
||||| | |||||||| || ||| | |||| ||| | | |||||||| || ||
Sbjct 2171 AATGATTCTTCTGTCTTCAGGTTTGGTTTTGATTGTGTCAATCACCTTTTGCAGTTGGTC 2112
Query 27462 CACCCCCATCCCCGAGTA-GTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 27520
|| || | || || | || || || |||| || || | ||| |||||
Sbjct 2111 TACTCCTTGACGTGAATACATTTAAATCCACATCTTTGTATTCAGCCACCAAAGACCTCC 2052
Query 27521 ATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 27580
| || || | | || || || | || || ||||| ||| || || |||
Sbjct 2051 ACTGAAAGCTATGAACTGGGCCTAAATCCCCTTCTTCTCTGGTGGAGAGTACCAGGCTGT 1992
Query 27581 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 27640
|||| ||||||| ||| |||| ||| |||||||| || || ||||| || ||||| |
Sbjct 1991 CCAAGAAGTCTCGGGACCCGTGGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCCT 1932
Query 27641 TGGAGTTTGTGGACCCTCTGACGAACCACAGC 27672
| | |||||||| || ||| |||||||||
Sbjct 1931 TAGCATTTGTGGAGCCCTTGATCAACCACAGC 1900
>seq397969
Length=7843
Score = 140 bits (154), Expect = 2e-28
Identities = 130/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||| |||||
Sbjct 7712 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 7653
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || |||||||| || ||||||||| | ||||| || || ||||| || |
Sbjct 7652 ACACCCAGGCCCATGTCTCCTGACCTCTGGAACAGCTGGCAGGACAGCTCACCGTTCACC 7593
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGG 27372
||||| ||||| || | |||||||||||| || || |||||||||
Sbjct 7592 ACGTAGAACTGGCAAAGGGCGTGGCACGGGGGTAGGGCCATGAGG 7548
Score = 87.8 bits (96), Expect = 1e-12
Identities = 120/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||| || |||| || || || ||||||||||| || || || || || || || | ||
Sbjct 4453 CATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATC 4394
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|| ||| | ||| ||| ||| ||||||| ||||||| ||| || ||||| ||
Sbjct 4393 CCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCATC 4334
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
|||||| || || ||||| || ||||| || | ||||||||| ||
Sbjct 4333 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 4286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 367609282155164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |