Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 435 4e-117
seq404197 372 4e-98
seq327453 136 6e-27
seq196131 120 4e-22
seq400361 107 3e-18
seq346476 107 3e-18
seq418289 104 3e-17
seq265909 104 3e-17
>seq366024
Length=42324
Score = 435 bits (482), Expect = 4e-117
Identities = 631/890 (71%), Gaps = 3/890 (0%)
Strand=Plus/Minus
Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383
||||| |||| ||| | || || || ||||| | ||||| | || ||||| || |||
Sbjct 18359 GACATCACTCTCATCCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCT 18300
Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443
|||| ||| ||||| |||||||| ||||| ||||| || | ||| || ||||
Sbjct 18299 TCCAGTGAAATATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAA 18240
Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503
|| | || || ||||| ||||| |||||||| || ||| ||||||| |||
Sbjct 18239 CCCAGCTCCCGCATAAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAAAGTGCAA 18180
Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563
||||| || ||||| || || || || || ||||| || ||||| ||||| || | ||
Sbjct 18179 TTCATCCCAATGAGCTTCACTGGCAGGGCATCCGTGAGGAACTCCTGTTCTATTCTAACT 18120
Query 46564 GCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAAC 46623
|||| ||||| || | ||| | | ||| ||| || | || ||||| ||
Sbjct 18119 GCATTGACGATTATTTATTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAAT 18060
Query 46624 ATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAAT 46683
|| | || ||||| ||||| || | || || ||||| ||||| | ||| || ||||||
Sbjct 18059 ATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAAT 18000
Query 46684 GTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAA 46743
||||| || || || || || || ||||||||||| ||||| | || ||||| ||||||
Sbjct 17999 GTGAGGCCGGGTATCAGACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAA 17940
Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA 46803
||||| || ||||| || || || || || || | | ||||| || | || || ||
Sbjct 17939 AAGAAGATTCCTTCCACTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCTCTTTG 17880
Query 46804 TGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATA 46860
| ||||| | |||||||| ||||| |||||||||||||||||||| || |||
Sbjct 17879 TCCCCGATCCAGCACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATA 17820
Query 46861 GCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920
|| || |||||||| | |||| | |||||||| || || || || | ||||||
Sbjct 17819 GCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTA 17760
Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980
|||||||| ||||| |||||||| || || || | || || || ||||| | |||||
Sbjct 17759 TACATTTCAGAATGGATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCC 17700
Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040
|||||||| || ||| | ||| | || ||| || ||||| ||||| ||||||||
Sbjct 17699 GTAATCTGAACTTCTTGGCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTT 17640
Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTC 47100
|| ||||| || |||| | ||| ||| |||||| | || || | |||| | |
Sbjct 17639 GCTGCAAAGAAAGCCAGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCC 17580
Query 47101 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCT 47160
|||| | || || || || | || || |||||||||||||| || || ||||| |||
Sbjct 17579 CAGTGCTGAATGTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCT 17520
Query 47161 TTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
|| |||||||| | ||| |||||| | |||| ||| ||||| || |||||
Sbjct 17519 TTCTTATACATCTGCCAAATATCATGGTATTTGATAGGAAAGATGACAAA 17470
>seq404197
Length=65104
Score = 372 bits (412), Expect = 4e-98
Identities = 614/883 (70%), Gaps = 7/883 (1%)
Strand=Plus/Minus
Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383
||||| |||||||| | || || || ||||| | ||||| || || ||||| || |||
Sbjct 53082 GACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 53023
Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443
|||| ||| |||| |||||||| ||||| ||||| || | ||| || ||||
Sbjct 53022 TCCAGTGAACTATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAA 52963
Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503
|| | || || ||||| ||||| | ||||| || ||| ||||||| | |||
Sbjct 52962 CCCAGCTCCAGCATAAGTCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCGCAA 52903
Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563
||||| || ||||| || || | | |||||||| || ||||| ||||| || | ||
Sbjct 52902 TTCATCCCAATGAGCTTCACTGTCGGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACT 52843
Query 46564 GCATC--CGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAA 46621
|||| ||||| | || || ||| | | ||| ||| || | || ||||| |
Sbjct 52842 GCATTGACGATAATTTCTTTG--ACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGA 52785
Query 46622 ACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAA 46681
|||| | | ||||| ||||| || | || || ||||| ||||| | ||| || ||||
Sbjct 52784 ACATCAGGAAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAA 52725
Query 46682 ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG 46741
||||||| || ||||| ||||| | || |||||||| ||||| | || ||||| ||||
Sbjct 52724 ATGTGAGGCCGGGCATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAG 52665
Query 46742 AAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCAT 46801
||||||| || ||||| || || || || || || | | || || ||| || || || |
Sbjct 52664 AAAAGAAGATTCCTTCCACTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGCCTCTT 52605
Query 46802 TATGA---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTA 46858
| | ||||| | |||||||| ||||| |||||||||||||||||||| || |
Sbjct 52604 TGTCCTCGATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAA 52545
Query 46859 TAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGAC 46918
| || || |||||||| | |||| | ||||| || || || || || | ||||
Sbjct 52544 TGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTGAATGTAAGTGTCAATGAGGAGAC 52485
Query 46919 TATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 46978
|||||||||| ||||| |||||||| || || || || || || || ||| | ||||
Sbjct 52484 TATACATTTCCGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAATAATGGGCTT 52425
Query 46979 CAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCAC 47038
| |||||||| || ||| | || || || || || ||||| |||| || ||||
Sbjct 52424 CCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCGTCAC 52365
Query 47039 TAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTAT 47098
| || ||| | || | || ||||| | | |||||| | || || | |||| |
Sbjct 52364 TTGCTGCAGAGAAAGGCAGGACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTT 52305
Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158
|| || | || || || || | || || || ||||| |||||||| || ||||| |
Sbjct 52304 CCCGGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCCGTCCAGAAGGAAGCCTCAG 52245
Query 47159 CTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAA 47201
| || ||| |||| | ||| |||||||| ||| ||| |||||
Sbjct 52244 CGTTCTTACACATCTGCCAAATATCACGGTATCCGATAGGAAA 52202
>seq327453
Length=26950
Score = 136 bits (150), Expect = 6e-27
Identities = 110/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| ||||| ||||| |||||||| || ||||||||||| ||||| | ||
Sbjct 17788 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGTTCAATTGAC 17847
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| |||||||| || ||||||||||||||||| ||||| || || | | ||||||
Sbjct 17848 TCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAACTG 17907
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 17908 TTTCTTATACCAT 17920
Score = 123 bits (136), Expect = 4e-23
Identities = 130/171 (76%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| |||||||| ||||| || || |||||| ||| | || || || ||||| || |
Sbjct 15556 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 15615
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
||| ||||| |||||||| |||||||||||||| ||||| ||||| || | | ||| |
Sbjct 15616 TCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGTACGGTTT 15675
Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614
| |||| |||||||| | ||| || ||| ||| || | ||||| ||||
Sbjct 15676 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 15726
>seq196131
Length=2042
Score = 120 bits (132), Expect = 4e-22
Identities = 126/166 (76%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| |||| ||| |||||||| ||||| | || || ||||| || || || || || ||
Sbjct 1352 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCGATCCTTGCTGCCAGGATG 1293
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| |
Sbjct 1292 GCATAGTCAGGGTGCTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 1233
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | |||||| || || | |||| ||||| || ||||||||||
Sbjct 1232 TCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 1187
>seq400361
Length=55729
Score = 107 bits (118), Expect = 3e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || ||||| || || |||||||| ||||| | || |
Sbjct 38420 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 38479
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || |
Sbjct 38480 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 38539
Query 46772 CGAC 46775
| ||
Sbjct 38540 CCAC 38543
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186
||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| || ||| |
Sbjct 46336 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATGTCAGG 46395
Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212
|| ||||| ||||| || |||||||
Sbjct 46396 GTACTGGATTGGAAAGATGACAAATC 46421
>seq346476
Length=8320
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || ||||| || | || ||||| ||||| || ||||| || |||||||| || |||
Sbjct 4620 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 4679
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
|||||||||||| | || || ||||| || ||||| || |||| || | |||||||
Sbjct 4680 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATGCCCACAGATACCCTCATCAAC 4739
Query 77114 ATATGCTGAGGTCGTTC 77130
|||||||| |||| |||
Sbjct 4740 ATATGCTGTGGTCTTTC 4756
>seq418289
Length=29330
Score = 104 bits (114), Expect = 3e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|| ||||| ||||| | ||| || ||||||||||| || ||||| || || || ||||||
Sbjct 26790 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGACCTCGTTTTTTG 26731
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| ||||| | || ||||| ||||||||||| || ||||| || || || || ||
Sbjct 26730 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGCT 26671
Query 46774 AC 46775
||
Sbjct 26670 AC 26669
Score = 84.2 bits (92), Expect = 3e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
|||||||| || || || || | |||||||||||||| ||||| |||||||| || ||
Sbjct 24796 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGGATGTTTTCCATGGC 24737
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995
|| || || || || ||||| | ||||| |||||||| || |||
Sbjct 24736 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 24691
>seq265909
Length=7629
Score = 104 bits (114), Expect = 3e-17
Identities = 219/322 (68%), Gaps = 15/322 (5%)
Strand=Plus/Minus
Query 44402 ATCTAGAGATTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGC 44461
||||| | ||| |||||||||| || || ||| |||| |||| | | || || || ||
Sbjct 2321 ATCTAAAACTTGAACTTCCTCTATTTCTGGGTAAAATATCCGTTCACAAATGAGCTGTGC 2262
Query 44462 TATTCTATCACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCC 44521
|||| |||| | | || | || ||| | ||||| ||| ||| | || | || ||
Sbjct 2261 AATTCGATCATCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 2202
Query 44522 AATGTTCCCCCTATAATCTTCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAG 44578
|| | || ||||||||||||||||| || ||| |||| ||||| || ||||
Sbjct 2201 AACACTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGC 2142
Query 44579 AGAAAGACCCGATCTAGGCGCTATTCTTCCATA----ACAGAATTTTGGCATAGACATAC 44634
|| | || || | || |||| ||| ||||| ||||| || | || ||
Sbjct 2141 AGCCAAGCCAGAACGTGGAGCTACTCTCCCATAGCACCCAGAA----GGAAGAGCTATCT 2086
Query 44635 GAATATCTGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACT 44692
|||| |||||||| | ||| | |||||||| ||| || | || ||||| || ||||
Sbjct 2085 GAATGTCTGTTTTCA-CAA-GGGCTTTCTCCATAGGTGGCACTGTGTAATCATAGGCACC 2028
Query 44693 GTATAAATCATATCCTGCCGCA 44714
||||| ||||| || || |||
Sbjct 2027 GTATAGGTCATAGCCCGCGGCA 2006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 709178625934080
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