Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq418776 127 5e-24
seq411564 123 6e-23
seq359707 116 8e-21
seq258579 111 4e-19
seq364176 105 2e-17
seq393589 100 7e-16
seq336898 95.1 3e-14
seq331670 93.3 1e-13
seq414080 89.7 1e-12
seq168090 87.8 4e-12
>seq418776
Length=96061
Score = 127 bits (140), Expect = 5e-24
Identities = 163/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || | || |||||||| |||||||||||||| | | |||
Sbjct 55100 CCTCAGACGGAGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 55041
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || |||||||||||||||| ||| | | ||| ||
Sbjct 55040 GCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGGATGCC 54981
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCA 152060
|||||| || || || || || ||| |||| | | |||| || |||| || ||
Sbjct 54980 TTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCC--ACCTCC 54923
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || |||| | || ||||||||||||| ||||||
Sbjct 54922 AGGGTGATGGTCTTGCNNNTCAGGGTCTTCACGAAGATCTGCAT 54879
>seq411564
Length=61085
Score = 123 bits (136), Expect = 6e-23
Identities = 165/227 (73%), Gaps = 8/227 (4%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || ||||||||||| |||||||||||||| | | |||
Sbjct 40448 CCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGT 40507
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC--CGCCGAGATT 152000
| || ||||| || ||| || || ||||| |||||||||||||| | | |||
Sbjct 40508 GCGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATG 40567
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACT 152057
|||||||| || || || || || ||| ||| | | |||| ||| ||| ||
Sbjct 40568 CCTTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTC---ACTGGGCTCCACC 40624
Query 152058 TCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || |||||||| || |||||| |||||| ||||||
Sbjct 40625 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 40671
>seq359707
Length=5412
Score = 116 bits (128), Expect = 8e-21
Identities = 163/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || ||||||||||| |||||| ||||||| | |||
Sbjct 2571 CCTCAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAAGGAGT 2630
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
|||||||| || ||| || || ||||| |||||||||||||| | | ||| ||
Sbjct 2631 GTGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 2690
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCA 152060
||| || || || || || || || ||| | | ||| ||| | ||| || ||
Sbjct 2691 TTCTTTATCCTGGATCTTGGCCTTCACGTTCTTGATGGTGTCACTGGA--CTCCACCTCC 2748
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || ||||| || | ||||||||||||| |||||||||
Sbjct 2749 AGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATTTT 2795
>seq258579
Length=20613
Score = 111 bits (122), Expect = 4e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||||||||||||| ||||| ||||| | |||||| || | ||| | |
Sbjct 19186 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGT 19127
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || |||||||| | | |||||||||
Sbjct 19126 CCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 19067
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| || || || || ||||||||
Sbjct 19066 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTG 19007
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || ||||||||||| | |||||| ||
Sbjct 19006 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 18966
>seq364176
Length=18321
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||| || | ||||| |
Sbjct 5348 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTACGT 5407
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || |||||||| | | |||||||||
Sbjct 5408 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 5467
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | ||| | || | || || || |||||
Sbjct 5468 TTATCCTGGATCTTGGCGTTTACATTTTCTGTTGTATCCAAGGGTTCGACCTCGAGAGTG 5527
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || ||||||||||| | |||||| ||
Sbjct 5528 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 5568
>seq393589
Length=19132
Score = 100 bits (110), Expect = 7e-16
Identities = 153/217 (71%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||||||||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 8061 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 8002
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || |||||||| | || |||||||||
Sbjct 8001 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCC 7942
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| | || | || || | |||||
Sbjct 7941 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAGTG 7882
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103
|| || || || || || ||||||| ||| | |||||
Sbjct 7881 ATGGTCTT-CCTGTCAGGGTCTTCATGAAAATCTGCA 7846
>seq336898
Length=33758
Score = 95.1 bits (104), Expect = 3e-14
Identities = 155/222 (70%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||||||||| ||||| |||||||| || | ||||| |
Sbjct 29866 AGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 29807
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || | |||||||| | | |||||||||
Sbjct 29806 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGGTCAGGAGGAATTCCTTCC 29747
Query 152007 TTTTCTTGAATTTTTTGTTTGACA-GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
|| || || | || || ||| | |||| | || || || || || |||||
Sbjct 29746 TTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGT 29687
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| | | || || || ||||||| ||| | |||||| ||
Sbjct 29686 GATGGCCATCCCTGTCAGGGTCTTCAAGAAAATCTGCATATT 29645
>seq331670
Length=23129
Score = 93.3 bits (102), Expect = 1e-13
Identities = 148/210 (70%), Gaps = 12/210 (6%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|| |||||||| |||||||||||||| | | ||| | |||||||| | ||| ||
Sbjct 21986 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGTTTGCCT 22045
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT---TTGT 152024
|| |||| |||||||||||||| || | ||| ||||| || || || || || |
Sbjct 22046 GCAAAGAGGAGCCTCTGCTGGTCAGCGGGGATGCCTTCTTTATCCTGGATCTTGGCATCC 22105
Query 152025 TTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081
|||| ||| || |||| ||| ||| || || || || || || |||| ||
Sbjct 22106 AGGACATTCT---CGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTGCAGGTC 22159
Query 152082 AGAGTCTTCACGAAGACCTGCATTTTACCC 152111
|| ||||||| ||||| |||||| | ||||
Sbjct 22160 AGGGTCTTCATGAAGATCTGCATATCACCC 22189
>seq414080
Length=5684
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958
||||||||||| ||||| ||||| |||||||| || ||||| | |||||||| ||
Sbjct 4725 AGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAGT 4670
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|| || || ||||| || || |||||||| | | ||||||||||| || || ||
Sbjct 4669 TGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATC 4610
Query 152019 TTTTGTTTGACA-GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077
|| || ||| | ||| | ||||| || ||||||||||| || || | ||
Sbjct 4609 TTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTGATGGTCAT-CC 4551
Query 152078 CGTGAGAGTCTTCACGAAGACCTGCA 152103
| || ||||||| ||| | |||||
Sbjct 4550 CCAGAAGGTCTTCATGAAAATCTGCA 4525
>seq168090
Length=9538
Score = 87.8 bits (96), Expect = 4e-12
Identities = 151/217 (70%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | || || || |||||||| |||||||||| ||| | | ||| ||||||
Sbjct 8499 AGGACCTGGTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCT 8558
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | ||| ||||||| ||
Sbjct 8559 TCCAGATGCTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAG-GATGCCTTCCTCATCC 8617
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| || | | |||| ||| |||||| || || || ||
Sbjct 8618 TGGATCTTGGCCTTCACATTCCTGATGATGTC---ACTGGGCTCTACCTCCAGGGTGATG 8674
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106
|| |||| || | ||||||||||||| |||||||
Sbjct 8675 GTCTTGCTGGTCAACGTCTTCACGAAGATTTGCATTT 8711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147590454692924
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