Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq366024 219 4e-52
seq404197 143 3e-29
seq400361 111 2e-19
seq418289 93.3 4e-14
seq387339 84.2 2e-11
>seq366024
Length=42324
Score = 219 bits (242), Expect = 4e-52
Identities = 399/584 (68%), Gaps = 0/584 (0%)
Strand=Plus/Minus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|| ||||| ||||| |||| || || || || ||||| | |||||| |||||||| |
Sbjct 18053 CAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 17994
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|| || || | ||||||||||| | ||| ||||| | ||||| || || ||||||||
Sbjct 17993 CCGGGTATCAGACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAG 17934
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
|| || || || || |||||||| || | |||| ||| | || || | | ||
Sbjct 17933 ATTCCTTCCACTGCAGCAAAGGCTACGAAACGTTCTCCATACGTAGCCTCTTTGTCCCCG 17874
Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748
||||| | ||||| |||||| |||||||| ||||| ||||| || ||
Sbjct 17873 ATCCAGCACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTG 17814
Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808
|||||||| |||||| |||| | || || || ||||| || | ||||||||||
Sbjct 17813 AAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATT 17754
Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868
|||||||| || ||||| || ||||| | || ||||| ||||| | ||||| | |
Sbjct 17753 TCAGAATGGATGTTTTCCATGGCAATTAGGAAGCCATAGAAACAACGGGCTTCCGTAATC 17694
Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928
||||| || | ||| | | || ||||| || || || |||||||| || |||
Sbjct 17693 TGAACTTCTTGGCTAAACTGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCA 17634
Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988
|||||||| |||| || || |||| ||| || |||| | || ||| |
Sbjct 17633 AAGAAAGCCAGAATATGCGAAATGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGC 17574
Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048
| ||| || || || | || || || ||| |||||||||| ||| || ||||
Sbjct 17573 TGAATGTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 17514
Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092
||||| |||||||||||| | || || ||||| || || ||
Sbjct 17513 TACATCTGCCAAATATCATGGTATTTGATAGGAAAGATGACAAA 17470
>seq404197
Length=65104
Score = 143 bits (158), Expect = 3e-29
Identities = 235/339 (69%), Gaps = 0/339 (0%)
Strand=Plus/Minus
Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571
||||| ||||| |||| || || || || ||||| | |||||| |||||||| | ||
Sbjct 52773 GCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCG 52714
Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631
||||| | ||||| ||| || | ||| ||||| | ||||| || || |||||||| ||
Sbjct 52713 GGCATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATT 52654
Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691
|| || || || |||||||| || | ||| | | | | || | | || |||
Sbjct 52653 CCTTCCACTGCGGCAAAGGCTACGACACGCTTTCAGTACCTAGCCTCTTTGTCCTCGATC 52594
Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAG 23751
|| | ||||| |||||| |||||||| ||||| ||||| || || |||
Sbjct 52593 CAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATGGCGTTGAAG 52534
Query 23752 AGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCA 23811
||||| |||||| |||| || || || ||||| || | ||||||||||||
Sbjct 52533 AGAAATTCCCTTTCTTTGGAATCTTGAATGTAAGTGTCAATGAGGAGACTATACATTTCC 52474
Query 23812 GAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA 23850
||||| || ||||| || || || || || ||||| |||
Sbjct 52473 GAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAA 52435
>seq400361
Length=55729
Score = 111 bits (122), Expect = 2e-19
Identities = 99/124 (80%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || || || | |||||| ||||| || | ||| ||||| | ||||| ||| |
Sbjct 38420 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 38479
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| ||||| |||||||| ||||| || |||||||| || || ||||| |||||||
Sbjct 38480 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 38539
Query 23651 CCAC 23654
||||
Sbjct 38540 CCAC 38543
>seq418289
Length=29330
Score = 93.3 bits (102), Expect = 4e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
|| || || ||||| | |||||| |||||||| | || ||||| | |||||||||||
Sbjct 26790 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGACCTCGTTTTTTG 26731
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| ||||| | ||||| || || |||||||| || || || || || ||||||||
Sbjct 26730 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGCT 26671
Query 23653 ACAAGACGT 23661
|| | ||||
Sbjct 26670 ACGACACGT 26662
>seq387339
Length=24907
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| | ||||||||||||||||| |||||| ||||||||||||| |
Sbjct 14183 CTCCTGGGCTCAAGCAGTCCTCCTGCCTCAGCCTCCTGAGTAGGTGGGATTACAGGCTCA 14124
Query 8465 AGCCACCACGCCAAGC 8480
|||||||| || |||
Sbjct 14123 GGCCACCACACCCAGC 14108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518740775141600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |