Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq258579 114 9e-21
seq359707 113 3e-20
seq411564 111 1e-19
seq418776 105 5e-18
seq364176 105 5e-18
seq393589 91.5 1e-13
seq168090 91.5 1e-13
>seq258579
Length=20613
Score = 114 bits (126), Expect = 9e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| | | ||||||||| | |||||| || | | ||
Sbjct 19186 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGT 19127
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || |||||||||| | ||||| || | ||| | ||||||
Sbjct 19126 CCATCTTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 19067
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| | || | || ||| ||||| | ||
Sbjct 19066 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTCAAGAGTG 19007
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| |||||||||||||| || |||||
Sbjct 19006 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 18969
>seq359707
Length=5412
Score = 113 bits (124), Expect = 3e-20
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169
|| || ||||| | | |||||||| || || ||| || |||||| ||||||| |
Sbjct 2566 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGCTGTAATCAGAA 2625
Query 44170 -GAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
|||| |||| | || |||||||| || || |||||||| | | |||||| || |
Sbjct 2626 GGAGTGTGGC---CATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGG 2682
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTC 44286
|| | ||||| || ||| ||||| ||||| |||| | |||||||| ||| ||
Sbjct 2683 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC-GTTCTTGATGGTGTCACTGGACTC 2741
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || || ||||| || || | ||||||||||||||| |||||
Sbjct 2742 CACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2792
>seq411564
Length=61085
Score = 111 bits (122), Expect = 1e-19
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || ||| || |||||||||||||| | | ||| |||| |||
Sbjct 40461 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTCC 40520
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC--TGAAGGCACACCTTCCTTTTCCG 44246
||||| || || |||||||| | | |||||| || | || | |||||||| |||
Sbjct 40521 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGGGATGCCTTCCTTATCCT 40580
Query 44247 TTATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| | ||| | |||||||| || |||||||||| || || |||
Sbjct 40581 GGATCTTGGCCTTC-ACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 40639
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||||||| ||||||| |||||
Sbjct 40640 TTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 40671
>seq418776
Length=96061
Score = 105 bits (116), Expect = 5e-18
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | |||||||| | || ||| || |||||||||||||| |
Sbjct 55105 CCACCCCTCAGACGGAGGACCAGGTGCAATGTTGACTCTTTCTGGATGTTGTAATCAGAA 55046
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || | || |||||||| || || |||||||| | | ||||| || | ||
Sbjct 55045 AGAGTGCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTAGTCAGGGGGG 54986
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| ||||| | | |||||||| ||| ||||||
Sbjct 54985 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGACTCCACC 54926
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || ||||| | | ||||||||||||||||| |||||
Sbjct 54925 TCCAGGGTGATGGTCTTGCNNNTCAGGGTCTTCACGAAGATCTGCAT 54879
>seq364176
Length=18321
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||| || | | ||
Sbjct 5348 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTACGT 5407
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || |||||||||| | ||||| || | ||| | ||||||
Sbjct 5408 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 5467
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| || | || || | || || || ||| ||||| | ||
Sbjct 5468 TTATCCTGGATCTTGGCGTTTACATTTTCTGTTGTATCCAAGGGTTCGACCTCGAGAGTG 5527
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| |||||||||||||| || |||||
Sbjct 5528 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 5565
>seq393589
Length=19132
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/217 (70%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| | | ||||||||| |||||||| || | | ||
Sbjct 8061 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 8002
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || |||||||||| | ||||| || | | | ||||||
Sbjct 8001 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCC 7942
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| || || || ||| |||| | ||
Sbjct 7941 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTTGAGAGTG 7882
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
|| ||| |||| || |||||||||| ||| || ||||
Sbjct 7881 ATGGTC-TTCCTGTCAGGGTCTTCATGAAAATCTGCA 7846
>seq168090
Length=9538
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/213 (71%), Gaps = 9/213 (4%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGT-TGGCGCTCGTCG 44185
||| |||| || || ||| || |||||||||| ||| | |||| |||| | ||
Sbjct 8502 ACCTGGTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGC---CATCT 8558
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
||||| ||||| || |||||||| | | |||||| || | ||| | ||||||| |||
Sbjct 8559 TCCAGATGCTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAGG-ATGCCTTCCTCATCC 8617
Query 44246 GTTATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||||| ||||| ||| |||| || || ||||||| || || ||
Sbjct 8618 TGGATCTTGGCCTTCACA-TTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGT 8676
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| | || | ||||||||||||||||||||
Sbjct 8677 CTTGCTGGTCAACGTCTTCACGAAGATTTGCAT 8709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 358141363758948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |