Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq123318 84.2 2e-11 >seq123318 Length=9803767 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||| || | |||| |||||| || | ||||| || |||| || || | || ||| Sbjct 4075206 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 4075147 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | ||||| |||||||| |||| | ||| || || | || | ||||||||||| Sbjct 4075146 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCTTGT 4075087 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 ||| | | ||||| | ||| ||||| | | ||| || || | || || ||||| Sbjct 4075086 ATCTTCCCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTTTTA 4075027 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCATTTTCT 43114 || || || || |||||||| || |||||| ||| Sbjct 4075026 CCAGTGAGGGTCTTCACAAAGATCTGCATTGTCT 4074993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380772660160998