Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq123496 123 2e-23 >seq123496 Length=5777196 Score = 123 bits (136), Expect = 2e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| || ||||| ||||| ||||| |||||||| ||||||||||| Sbjct 4409091 GGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAAGAGGTGATGCCACAGGCT 4409032 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||||| || ||||| || || ||||| || || ||||| || ||||||||||| Sbjct 4409031 GAGAACCACGGGCCTGACATCAAGGAGCACGTGAACTCTCTGGGGGAGAAGCTGAAGACC 4408972 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | | || || ||||| ||||| Sbjct 4408971 CTCCGGCTGCGGCTGCGGCGCTG 4408949 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || || || || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 4406705 AGCTCCAAGAGAGGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 4406646 Query 127439 TCGAGACTTACATG 127452 | || || |||||| Sbjct 4406645 TAGAAACCTACATG 4406632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429381256140872