Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08]
128,431 sequences; 2,828,031,685 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq123496 145 8e-30
>seq123496
Length=5777196
Score = 145 bits (160), Expect = 8e-30
Identities = 121/148 (82%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| ||||||||||||||||||||||| || || |
Sbjct 4409102 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAAGAGGTGA 4409043
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
||||||||||||| || || | || || ||| |||||||||||||||||||| ||||
Sbjct 4409042 TGCCACAGGCTGAGAACCACGGGCCTGACATCAAGGAGCACGTGAACTCTCTGGGGGAGA 4408983
Query 10260 ATCTAAAGACCCTAAGGCTTCGCTTGCG 10287
| || |||||||| |||| || ||||
Sbjct 4408982 AGCTGAAGACCCTCCGGCTGCGGCTGCG 4408955
Score = 82.4 bits (90), Expect = 8e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || | || |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 4406705 AGCTCCAAGAGAGGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 4406646
Query 10419 TAGAAGCATACATGACCATGAAAAT 10443
||||| | |||||||| | ||| ||
Sbjct 4406645 TAGAAACCTACATGACAACGAAGAT 4406621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546500444274560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |