Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq123496 127 2e-24 >seq123496 Length=5777196 Score = 127 bits (140), Expect = 2e-24 Identities = 117/148 (79%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| |||| ||||||||||| || |||||||| || || | Sbjct 4409102 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAAGAGGTGA 4409043 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 ||||||||||||| ||||| | ||||| ||| || || || || ||| |||| || | Sbjct 4409042 TGCCACAGGCTGAGAACCACGGGCCTGACATCAAGGAGCACGTGAACTCTCTGGGGGAGA 4408983 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||||||| ||||| || ||||| Sbjct 4408982 AGCTGAAGACCCTCCGGCTGCGGCTGCG 4408955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551829475358240