Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq121894 86.0 1e-11 >seq121894 Length=21300 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 193227 AAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATA 193286 || || | ||| || || |||||||| |||||||||||||| || || |||| |||| | Sbjct 20626 AAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCTTTATCCTGGATCTTGGCCTTTACA 20685 Query 193287 TTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTT 193346 ||| || ||||| || | |||||| || ||||| || | || ||| | || || || Sbjct 20686 TTTTCTATTGTATCTGAGGGCTCAACCTCGAGAGTGATGATGTTCCCTATCAGAGTCTTC 20745 Query 193347 ACAAATATTTGCATTTT 193363 || || || ||||| || Sbjct 20746 ACGAAAATCTGCATCTT 20762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898210106071920