Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_023602.1 Length=50781 Score E Sequences producing significant alignments: (Bits) Value seq67643 138 4e-28 >seq67643 Length=658 Score = 138 bits (152), Expect = 4e-28 Identities = 251/363 (69%), Gaps = 6/363 (2%) Strand=Plus/Minus Query 7885 GTTTACGAGCCCGGCCGCGACATCTCCGGCCGCGCCAGCGCAGCCGTCACCGGGAAGCGA 7944 || || || |||||| ||||||| ||| | || | ||| || || || | | || Sbjct 481 GTGTATGACCCCGGCGCCGACATCACCGCCGAAGCTACCGCCGCGGTGACTGCGCGCCGT 422 Query 7945 TTCCTGAAGATCTCCGGCAACCGCA---ACGGCGGCAACATCGCCGTTGCACACGCGGAC 8001 ||||| | | ||||| ||||||| |||||||||| ||||| || || | || | | Sbjct 421 TTCCTCGCGGTGTCCGGTAACCGCACCGACGGCGGCAATATCGCGGTCGCGCCGGCCGCC 362 Query 8002 GCC-GGCGGACGTGTCTGCGGCGTCTCCAAGTACGACGCGGCATCCGGCGCGATCGTCGG 8060 | | || | || | |||||||| || ||||||| || |||| | ||||| | Sbjct 361 GACTGGTGTCCGCGCGTGCGGCGTGGCCGGCGACGACGCAGCGATCGGCCAGCTCGTCCG 302 Query 8061 CGTCGCGCGCGGCAATTCCCGCGTCACTCACGTCACCGCGAGCGGCGCGCTCGCGGCGTT 8120 ||| | |||||| || || || ||| || || ||||| || ||| |||| || Sbjct 301 CGTGGTGCGCGGTAACTCGCGTGTCGTTCGGGTGACCGCCTCGGGTGCGATCGCCGCCGG 242 Query 8121 CGACGAAGTCCAGGTCGGTACCAACGGCACGGCGGTCAAGCTCGAC-GCCGGCGTCGCCG 8179 || ||||||||||||||| | |||||||| || | | | | | | |||||| |||| | Sbjct 241 CGCCGAAGTCCAGGTCGGCGCGAACGGCACCGCAG-CGACCAAGGCTGCCGGCATCGCAG 183 Query 8180 TGGGATACGCGCTGACCGCAGCAACCAACGGCGGCGACGCCGAGATCAGCCTCTACTGAA 8239 | |||||||| | |||| ||| || ||| | ||||||||| ||| ||||||||| Sbjct 182 TCGGATACGCCATCACCGGCGCAGCCGACGCCACCGACGCCGAAATCTCGCTCTACTGAG 123 Query 8240 AGG 8242 ||| Sbjct 122 AGG 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162129954979146