Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq123496 84.2 2e-11 >seq123496 Length=5777196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 133104 TGGGGTGCCAAGCACTCTCGGAGATGATCCAGTTCTACCTGGAAGAAGTCATGCCGCAGG 133163 |||| |||||||| | ||||| ||||||||||| ||||||||||| || ||||| |||| Sbjct 4409093 TGGGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAAGAGGTGATGCCACAGG 4409034 Query 133164 CAGAGAATCACGGACC 133179 | ||||| ||||| || Sbjct 4409033 CTGAGAACCACGGGCC 4409018 Score = 82.4 bits (90), Expect = 7e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 133311 AGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTACA 133370 ||||||| || | ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct 4406705 AGCTCCAAGAGAGGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 4406646 Query 133371 TAGAGACATA 133380 |||| || || Sbjct 4406645 TAGAAACCTA 4406636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447092289497160