Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq123537 107 6e-20 seq123149 107 6e-20 seq123343 104 7e-19 seq123282 104 7e-19 seq123620 102 3e-18 seq123211 100 9e-18 seq123383 98.7 3e-17 seq123361 98.7 3e-17 seq123318 98.7 3e-17 seq123113 98.7 3e-17 seq123481 95.1 4e-16 seq122213 93.3 1e-15 seq120473 91.5 5e-15 seq123475 89.7 2e-14 seq123511 87.8 6e-14 seq113287 87.8 6e-14 seq123354 82.4 2e-12 seq117286 82.4 2e-12 seq123517 80.6 8e-12 seq10567 78.8 3e-11 >seq123537 Length=12650643 Score = 107 bits (118), Expect = 6e-20 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 12024383 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 12024324 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 12024323 TCCCGGGTTTCGGC 12024310 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 11897820 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 11897879 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11897880 CCGGGTTTCGGC 11897891 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 12034386 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 12034445 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 12034446 CCGGGTTTCGGC 12034457 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 11980359 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 11980418 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 11980419 TCCCGGGTTTCGGC 11980432 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 12006837 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 12006896 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 12006897 CCGGGTTTCGGC 12006908 Score = 98.7 bits (108), Expect = 3e-17 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 12187646 GGCTGAAATAGCTCAGTTGAGAGAGCATTAGACTGAAGATCTAAATGTCCCTGGTTCAAT 12187705 Query 2828 CCCGGGCTT 2836 ||| || || Sbjct 12187706 CCCAGGTTT 12187714 Score = 86.0 bits (94), Expect = 2e-13 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 2771 TGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATC-TAAAGGTCCCTGGTTCAACCC 2829 |||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 12012472 TGAAATAGCTCAGCTGGGAGAGAGTTAGACTGAAGATCTTAAAGGTCCCTGGTTCAACCC 12012413 Query 2830 CGGGCTT 2836 | || || Sbjct 12012412 CAGGTTT 12012406 >seq123149 Length=289317 Score = 107 bits (118), Expect = 6e-20 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 194338 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 194397 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 194398 TCCCGGGTTTCGGC 194411 >seq123343 Length=1454391 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 263102 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 263043 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 263042 CCGGGTTTCGGC 263031 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 268533 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 268474 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 268473 CCGGGTTTCGGC 268462 >seq123282 Length=851268 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 805164 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 805105 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 805104 CCGGGTTTCGGC 805093 >seq123620 Length=21467410 Score = 102 bits (112), Expect = 3e-18 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 19387521 ATGGCTGAAATAGCTCAATTGGGAGAGCATTAGTCTGAAGATCTAAAGGTCCCTGGTTCA 19387462 Query 2826 ACCCCGGGCTT 2836 | ||| || || Sbjct 19387461 ATCCCAGGTTT 19387451 >seq123211 Length=6889849 Score = 100 bits (110), Expect = 9e-18 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 69523 TAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGTT 69582 Query 2836 TCAGC 2840 || || Sbjct 69583 TCGGC 69587 >seq123383 Length=2329925 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 900590 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 900649 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 900650 CCGGGTTTCGGC 900661 >seq123361 Length=7474477 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6650558 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6650617 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6650618 CCGGGTTTCGGC 6650629 >seq123318 Length=9803767 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4063124 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4063183 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4063184 CCGGGTTTCGGC 4063195 Score = 84.2 bits (92), Expect = 7e-13 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| || ||| |||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 4803905 TGGCCAAAATAGTTCAGTTGGGAGAATGTTAGACTAAAGATCTAAAGGTCCCTGGTTCAA 4803964 Query 2827 CCCCGGGCTTCAGC 2840 || ||| |||||| Sbjct 4803965 TCCTGGGTTTCAGC 4803978 >seq123113 Length=1014976 Score = 98.7 bits (108), Expect = 3e-17 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| | Sbjct 15283 GCTGAAATAGCTCAGTTGGGAGAACATTAGACTGAAAATCTAAAGGTCCCTGGTTCAATC 15224 Query 2829 CCGGGCTTC 2837 | ||| ||| Sbjct 15223 CTGGGTTTC 15215 >seq123481 Length=3556251 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| | Sbjct 3191932 GCTGAAATAGCTCTGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAGTC 3191991 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3191992 CCGGGTTTCGGC 3192003 >seq122213 Length=148775 Score = 93.3 bits (102), Expect = 1e-15 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2771 TGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830 |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 76599 TGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAGTCCC 76540 Query 2831 GGGCTT 2836 || || Sbjct 76539 AGGTTT 76534 >seq120473 Length=11567 Score = 91.5 bits (100), Expect = 5e-15 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| | | Sbjct 11286 GCTGGAAAAGCTCAGTTGGGAGAGCATTAGCCTGAAGATCTAAAGGTCCCTGGTTCGATC 11345 Query 2829 CCGGG 2833 ||||| Sbjct 11346 CCGGG 11350 >seq123475 Length=11016076 Score = 89.7 bits (98), Expect = 2e-14 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||| | ||||||||||||| || ||||||||||||||| || | Sbjct 9766258 GAAATAGCTCAGTTGGGAGAACCTTAGACTGAAGATGTAGAGGTCCCTGGTTCAATCCTG 9766317 Query 2832 GGCTTCAGC 2840 || |||||| Sbjct 9766318 GGTTTCAGC 9766326 >seq123511 Length=7083958 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 197449 GCTGAAATAGCTCAGTTGGGAGATAATTAGGCTGAAGATCTAAAGGTCCCTGGTTCAA 197392 >seq113287 Length=9441 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| ||||||||||| |||||||||||||||||| | |||||| Sbjct 155 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGTTCTAAAGGTCCCTGGTTCGATCCCGGG 212 >seq123354 Length=4107284 Score = 82.4 bits (90), Expect = 2e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||| |||||| |||| |||||||||||||||||| |||||||| || || Sbjct 3175162 AAATAGCTCAGTTAGGAGAGTGTTAGGCTGAAGATCTAAAGGTCCTTGGTTCAATCCTGG 3175221 Query 2833 GCTTCAGC 2840 | |||||| Sbjct 3175222 GTTTCAGC 3175229 >seq117286 Length=5060 Score = 82.4 bits (90), Expect = 2e-12 Identities = 58/65 (89%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||| | | Sbjct 73 GCTGAA-TAGCTCAGTTGGGAGAGCGTTAGATTGAAGATCTAAGGGTCCCTGGTTCGATC 131 Query 2829 CCGGG 2833 || || Sbjct 132 CCAGG 136 >seq123517 Length=1989531 Score = 80.6 bits (88), Expect = 8e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||||||||| |||||||||||| ||||||||||||||||||| || || Sbjct 786747 AAATAGCTCAGTTGGGAGACTGTTAGACTGAAGACCTAAAGGTCCCTGGTTCAATCCTGG 786688 Query 2833 GCTT 2836 | || Sbjct 786687 GTTT 786684 >seq10567 Length=560 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 ||||||||||||||||| ||| ||||||||||||||| |||||||||||| || ||| Sbjct 351 TAGCTCAGTTGGGAGAGGGTTACACTGAAGATCTAAAGCTCCCTGGTTCAATCCAGGG 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15827335843995