Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08] 128,431 sequences; 2,828,031,685 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq123643 174 1e-38 >seq123643 Length=11888911 Score = 174 bits (192), Expect = 1e-38 Identities = 135/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| || || || ||||||||||| ||||| || | ||| Sbjct 574111 TGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCAATGTTGAAGGGCACACCCAGGCCC 574170 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| ||||| || || || | ||||||||||| |||||||||| | |||||||| ||| Sbjct 574171 ATGTCCCCCGACCGCTGGTACAACTGGCAGGACAACTCCCCATTCACCACGTAGAACTGG 574230 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| |||||| |||||||| ||||| ||||| ||||| Sbjct 574231 CAGAGGGCGTGGCATGGGGGGAGGGCCATGAGAGGCAGATC 574271 Score = 174 bits (192), Expect = 1e-38 Identities = 135/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||| ||||| |||||||| |||||| |||||||||| |||||||| | |||| Sbjct 574271 GATCTGCCTCTCATGGCCCTCCCCCCATGCCACGCCCTCTGCCAGTTCTACGTGGTGAAT 574212 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 |||||| ||||||||||| | || || || ||||| |||||||| | || ||||| ||| Sbjct 574211 GGGGAGTTGTCCTGCCAGTTGTACCAGCGGTCGGGGGACATGGGCCTGGGTGTGCCCTTC 574152 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 |||||||| || || || |||||||| ||||||||||| || Sbjct 574151 AACATTGCCAGCTATGCCCTGCTCACCTACATGATCGCACA 574111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447542765146320