Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bison_20bison_20bison_20[refseq_20GCF_5F000754665.1_202014-10-08]
128,431 sequences; 2,828,031,685 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq123318 154 3e-32
seq82137 131 4e-25
seq123338 123 6e-23
seq123197 122 2e-22
seq123218 98.7 2e-15
seq123262 96.9 8e-15
seq77427 96.9 8e-15
seq123040 84.2 5e-11
>seq123318
Length=9803767
Score = 154 bits (170), Expect = 3e-32
Identities = 170/225 (76%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | |||||| || || ||||| ||||| || ||||||||||| || | | ||
Sbjct 4075218 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 4075159
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || ||||||||| ||||| |||||||||||||| | | ||| |||
Sbjct 4075158 CGGCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCT 4075099
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| |||||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 4075098 TCTTTTTCTTGTATCTTCCCCTTGACATTCTCAATGGTGTC---ACTGGGCTCCACCTCC 4075042
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||||| || ||||| || ||||| |||||||| |||| |||||||
Sbjct 4075041 AGAGTGATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCATT 4074997
Score = 123 bits (136), Expect = 6e-23
Identities = 157/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | || ||||| |||||||| ||||||||||| || | | || | ||||||
Sbjct 4075437 AGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 4075378
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||||||||| ||||| |||||||||||||| | | ||| || || || |||
Sbjct 4075377 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 4075318
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || ||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 4075317 TGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 4075261
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | ||||||||||||| ||||||
Sbjct 4075260 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4075226
>seq82137
Length=2930
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | |||||| || || ||||| ||||| || ||||||||||| || | | ||
Sbjct 321 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 262
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || ||||||||| ||||| |||||||||||||| | | ||| ||
Sbjct 261 CGGCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 202
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 201 TCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 145
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || | ||||||||||||| ||||||
Sbjct 144 AGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 101
>seq123338
Length=16093809
Score = 123 bits (136), Expect = 6e-23
Identities = 165/228 (72%), Gaps = 6/228 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || || |||||||| |||||||||||||| | | |||
Sbjct 10050781 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 10050722
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || || || || ||||| |||||||||||||| | | || ||
Sbjct 10050721 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCC 10050662
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
|||||| || || || || || || |||| | | |||| ||| ||| || ||
Sbjct 10050661 TTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 10050605
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || ||||| || || || |||||||||| |||||||||
Sbjct 10050604 CAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 10050557
Score = 118 bits (130), Expect = 2e-21
Identities = 156/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || |||||||| |||||||||||||| | | ||| | ||||||
Sbjct 10050999 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 10050940
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| |||||||||||||| | | || || ||||| ||
Sbjct 10050939 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCC 10050880
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || || |||| | | |||| ||| ||| || || || || ||
Sbjct 10050879 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 10050823
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||||||||||| ||||||
Sbjct 10050822 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 10050788
>seq123197
Length=3943935
Score = 122 bits (134), Expect = 2e-22
Identities = 162/223 (73%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | || ||||||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 831046 AGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGCATGTTGTAGTCAGACAAAGTACAT 831105
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|||||||| || ||||| || || ||||| || || | |||||| | | |||||||
Sbjct 831106 CCATCTTCCAGTTGCTTT--CCCGCAAAGATCAGTCTTTTCTGGTCAGGAGGAATTCCTT 831163
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || || || || || ||| | ||||| | || || ||| || || ||||
Sbjct 831164 CCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCCGAGGGCTCAACCTCGAGAG 831223
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || || || ||||| | ||||||||||| | |||||| ||
Sbjct 831224 TGATGGTCTTCCCCGTCCGGGTCTTCACGAAAATCTGCATCTT 831266
>seq123218
Length=3948948
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/217 (71%), Gaps = 5/217 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| || |||||||||||||| ||||| ||||| |||||||| || ||||| |
Sbjct 2102198 AGTCTCAGTACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACAT 2102253
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||||| || || || || ||||| || || | |||||| | | |||||||||
Sbjct 2102254 CCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTTCTGGTCAGGAGGAATTCCTTCC 2102313
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || | || || ||| | |||| | | || || ||| || | |||||
Sbjct 2102314 TTATCCTGGACCTTGACCTTTACATTTTCTATGGTATCCGAGGGCTCGACCT-GAGAGTG 2102372
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103
|| || || ||| | || |||| |||||| | |||||
Sbjct 2102373 ATGGTCTTCCCCATCAGTGTCTCCACGAAAATCTGCA 2102409
>seq123262
Length=1326122
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||||||||| ||||| ||||| |||||||| || | ||||| |||||||
Sbjct 348138 ACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTTC 348079
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || || ||||| || |||||||||| | | |||| |||||| | ||
Sbjct 348078 AGTTGCTTGCCAGCAAAGATCAG--TCTGCTGGTCAGGAGGAATTCTTTCCTTATTCTGG 348021
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || || ||| | |||| | ||||| ||| || || ||||| || | ||
Sbjct 348020 ATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGCTCAACCTCGAGAGTGATGATGTTC 347961
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| | |||||||||||||| | |||||| ||
Sbjct 347960 CCTATCAGAGTCTTCACGAAAATCTGCATCTT 347929
>seq77427
Length=594
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||||||||| ||||| ||||| |||||||| || | ||||| |||||||
Sbjct 178 ACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTTC 237
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || || ||||| || |||||||||| | | |||| |||||| | ||
Sbjct 238 AGTTGCTTGCCAGCAAAGATCAG--TCTGCTGGTCAGGAGGAATTCTTTCCTTATTCTGG 295
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || || ||| | |||| | ||||| ||| || || ||||| || | ||
Sbjct 296 ATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGCTCAACCTCGAGAGTGATGATGTTC 355
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| | |||||||||||||| | |||||| ||
Sbjct 356 CCTATCAGAGTCTTCACGAAAATCTGCATCTT 387
>seq123040
Length=253963
Score = 84.2 bits (92), Expect = 5e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || ||||| ||||| |||||||||||||| | | || || |||
Sbjct 221156 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCC 221097
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || || |||| | | |||| ||| || || || ||
Sbjct 221096 TTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCCTGGGCTCCACCTCCAGGGTG 221037
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || ||||| || || ||||||||||||| |||||||||
Sbjct 221036 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 220996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151922162273201
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