Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq19 93.3 5e-14 >seq19 Length=65317831 Score = 93.3 bits (102), Expect = 5e-14 Identities = 145/205 (71%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 |||||||| |||||| | ||||| || | ||| | || ||||| ||||| ||||| || Sbjct 46988215 TTAGGCTGCAAACATGTTAAAGGCATCCTGTTATACGGKCCTCCAGGTTGYGGTAAGACC 46988156 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| |||| | || ||| | || || |||| | || || Sbjct 46988155 CTGTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCC--TAAAGTGGTCAAC 46988099 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || || ||| | | ||||||||||| || |||||||| ||||| || | || | ||| Sbjct 46988098 GGGCCGGAAATTCTCAACAAATATGTGGGAGAGTCAGAGGCTAACATTCGTAAACTCTTT 46988039 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 46988038 GCTGATGCTGAAGAGGAGCAAAGGA 46988014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871761651200