Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq23 322 6e-83 seq10 264 1e-65 seq15 212 8e-50 seq6 179 5e-40 seq3 179 5e-40 >seq23 Length=53331160 Score = 322 bits (356), Expect = 6e-83 Identities = 1030/1587 (65%), Gaps = 18/1587 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| |||| || ||||| ||||| | ||||| || || ||||| || Sbjct 27284945 TCATCCTCAGCTTTGTATTTTTCAGCATCCAGAACCATGCGCTCGATCTCTTCCTTGCTC 27284886 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| || ||||| | || || |||| | ||| || | Sbjct 27284885 AGCCGGCCCTTGTCATTGGTAATGGTGATCTTGTTGGCCTTGCCCGTGCTCTTGTCCATA 27284826 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || | ||||| | ||||||||| ||||| | || || | || | ||| || || Sbjct 27284825 GCTGTGACATTGAGAATACCATTGGCATCGATGTCAAAGGTCACCTCAATCTGAGGCACT 27284766 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 ||||| ||||| | || || || || | |||||| || || | |||| ||| Sbjct 27284765 CCCCTGGGTGCAGGAGGGATTCCAGTCAGATCAAAGCGCCCCAGCAGGTTGTTGTCCCGA 27284706 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | || || ||||| || | || ||| | || ||||| ||| Sbjct 27284705 GTCATGGCCCTCTCGCCCTCATACACCTGGATCAGCACGCCCGGCTGATTGTCTGAATAG 27284646 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || | ||| || ||| | ||| | || || || | || | | || | ||| Sbjct 27284645 GTGGTGAAAATCTGTGTCTGCTTCGTGGGGATGGTGGAGTTGCGCTTGATTAATACAGTC 27284586 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || ||| || | || | |||||| || | ||||||||| | | |||| Sbjct 27284585 ATGACTCCCCCTGCAGTCTCCAACCCTAAAGACAGGGGAGCCACGTCCAACAAAAGCAGG 27284526 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || || ||| | || ||| | || ||||| || || || | ||||| || Sbjct 27284525 TCCTGTACCTTTTCAGACTTATCCCCCATCAAAATGGCTGCCTGAACTGCAGCCCCATAG 27284466 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT 7108 || || |||||||||||||| || | || || || || ||| ||||| || ||| Sbjct 27284465 GCAACTGCCTCATCGGGGTTGATGCTCTTGTTGAGATCACGACCATTAAAGTAGTCCTGC 27284406 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 |||| |||| || |||||||| || || || || || || || || |||| | | Sbjct 27284405 AACAGCCTCTGAACCTTAGGGATTCGCGTAGAGCCCCCTACTAAGACAATGTCATGGATT 27284346 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTA 7225 || | |||||| ||||| | || ||||| | || || ||||| |||| | | || Sbjct 27284345 TTAGCTTTATCCATCTTGGCATCCCGAAGAGCCTTCTCCACAGGCTCCAGGGTGCCCCTA 27284286 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 |||| ||| ||||| || ||||| || || | ||| |||||||| ||||| ||| Sbjct 27284285 ---AACAGGTCTGCACACAACTCTTCAAACCGGGCTCTGGTGATGGATGTGTAGAAGTCA 27284229 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| || || | || |||||||| | | | | || | | || || | || | | Sbjct 27284228 ATGCCTTCATAAAGTGAGTCAATTTCCAAGTTGGCCTGGGTGCTAGATGACAGGGTCCTC 27284169 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | || || || || || || || | | || ||| ||| | || || Sbjct 27284168 TTGGCCCTTTCGCAGGCAGTGCGCAACCGCCTCACAGCCCGCTTGTTCTGGCTGATGTCC 27284109 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||||||||| | || || ||||| ||||| | | || || || ||||| Sbjct 27284108 TTCTTATGTTTCCTCTTGAATTCTTCCACAAAGTGGCTCACAAGCCTGTTGTCAAAATCC 27284049 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || ||||||||||| || ||||| || || || || || ||||| || || | || ||| Sbjct 27284048 TCTCCACCCAAGTGGGTGTCCCCAGCTGTGGCCTTAACCTCAAAAATCCCATCATCTATG 27283989 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TCG-TAT 7583 | | | || |||||||| || || |||||||| ||||| || | || | ||| | | Sbjct 27283988 GTCAGGACGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAAGACATGTCGCTCT 27283929 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | | | | ||||| | || || || || || || || || |||||||| |||| Sbjct 27283928 CCCTGACCTGCT--TTATCTAAGCCATAGGCAATGGCAGCAGCAGTGGGTTCATTGATAA 27283871 Query 7644 TACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | | || ||| || || || || ||| ||||||| || || || || ||||| || Sbjct 27283870 TTCTTAGCACA-TTGAGACCTGCGATAACACCCGCATCCTTGGTGGCCTGGCGTTGAGAG 27283812 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || |||||||| || || || | || || | ||||| | | || | | | | Sbjct 27283811 TCATTGAAGTAGGCTGGCACAGTGATCACAGCATTGGTGACAGTGTAGCCCAAAAAAGCC 27283752 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | || ||||| || || || ||||| || || || ||||||| ||| | Sbjct 27283751 TCAGCAGTCTCCTTCATCTTAGTTAGTACCATAGAAGAGATTTCTTCAGGATAAAAAGCT 27283692 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882 ||| |||| || || | || | | |||| || || | | | ||| || Sbjct 27283691 TTCTTTTCCCCTTTGTAGGACACCATTACCTTGGGCTT-GCCTC--CTTCATTGATTACT 27283635 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942 | | | |||| ||||||||| ||| || | || ||| ||||| || || Sbjct 27283634 TGGAAAGGCCAAAGTTTCATATCTGATTGCACGACAGGATCATTAAATTTTCTGCCTATC 27283575 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 ||||| || |||||||| || ||||| | ||| ||||||||| |||||||| || || Sbjct 27283574 AGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCTGCA 27283515 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || ||||| || || ||| || || || || || ||||| ||||| || || || Sbjct 27283514 TCGCCGATGAGCCGCTCAGTA---TCAGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTG 27283458 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122 || |||||||| || || || || || | ||| ||| | || || || || || || Sbjct 27283457 CCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGTTGGAACACCCCCACACAGGAGTAG 27283398 Query 8123 GTTGTTCCTAAATCAATACCGATTGCT 8149 || || || | || || ||||| ||| Sbjct 27283397 GTGGTGCCCAGGTCGATGCCGATAGCT 27283371 Score = 241 bits (266), Expect = 2e-58 Identities = 787/1214 (65%), Gaps = 24/1214 (2%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || || ||||| || ||||| || | |||||||| | | |||||| || || ||| Sbjct 27267288 GTCTCCAGTCCCAGCGACAGGGGAGCCACGTCCAGCAACAGCAGGTCCTGCACG--TTC- 27267344 Query 7004 TTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 ||| ||| | ||| | | |||||| || || |||| ||||||||| || |||||||| Sbjct 27267345 -TCCGACTTGTCCCCCATCAGGATGGCCGCCTGCACCGCCGCCCCGTACGCCACCGCCTC 27267403 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 |||||||| || | || || || || ||||| || | ||| | || | || Sbjct 27267404 GTCGGGGTTGATGCTCTTGTTGAGGTCGCGCCCGTTGAAGAAGTCCTGCAGCAGCTTCTG 27267463 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || || || || || |||| || | || | | | || || || Sbjct 27267464 CACCTTGGGGATGCGGGTGGAGCCCCCCACCAGGACCAGGTCGTGGATCTGCGCCTTGTC 27267523 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || | || || || || || | | ||||||| ||| Sbjct 27267524 CAGCTTGGCGTCGCGTAGCGCCTTCTCCACGGGCTCYAGGGTGCTCCGGAACAGGTCGGA 27267583 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||||| ||||| || || || | ||| ||||| || ||||| || | ||| ||| | | Sbjct 27267584 GCACAGCTCCTCGAACCGCGCCCTGGTGATGGACGTGTAGAAGTCGATGCCCTCGAACAG 27267643 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || || || || | | | | || | | || || || |||| ||| || ||||| || Sbjct 27267644 GGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGACGACAAGGTTCTCTTGGCCCGCTCGCA 27267703 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || || || | || | | ||| ||| ||| | || || ||||| || || | Sbjct 27267704 TGCGGTGCGCAGCCGCCTCACGGCCCGCTTGTTCTGGCTGATGTCCTTCTTGTGCTTCCT 27267763 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| || |||||| | || || ||||| || || || |||| ||| Sbjct 27267764 CTTGAACTCCTCCACGAAGTGGTTCACCAGCCTGTTGTCGAAGTCCTCCCCGCCCAGGTG 27267823 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || ||||| || || || || || || ||||| || | || || | | | || || Sbjct 27267824 CGTGTCCCCGGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCGATCGTCAGGATGGACAC 27267883 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTGT--- 7595 || ||||| || || ||||| ||||| ||||| ||||| || || | ||| Sbjct 27267884 GTCGAACGTGCCCCCTCCCAGATCAAAGATGAGCACGTTG----CGCTCCCCCTTGCCCG 27267939 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 || | || || ||||| ||||| || || ||||| || || || || || | || || Sbjct 27267940 TCCTGTCCAGGCCGTAGGCGATGGCGGCGGCCGTGGGCTCGTTGATGATCCTCAGCACGT 27267999 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 |||| || || || |||| || || || || || || ||||| ||||| ||||||| Sbjct 27268000 TCAGCCCCGCGATCACCCCCGCGTCCTTGGTGGCCTGCCGCTGCGAGTCGTTGAAGTAGG 27268059 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 |||| || || | ||||||| || || | || || |||| || ||||| || | Sbjct 27268060 CCGGCACGGTGATCACCGCGTTGGTCACCGGGTGGCCCAGGTACGCCTCGGCGATCTCCT 27268119 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGT 7835 |||| ||||| || |||||||| || ||||| || | ||| || || || || | Sbjct 27268120 TCATCTTGGTCAGCACCATCGACGAGATCTCCTCCGGGTAGAACGCCTTGGTCTCCCCCT 27268179 Query 7836 T-AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAA 7894 | | ||| || | | | | || || | | | || ||| || | | ||| Sbjct 27268180 TGTAGCTCACCTGC-ACCTTAGGCTTGT---CTCCGTCGTTGATGACGCGGAAAGGCCAG 27268235 Query 7895 TCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCA 7954 | ||||| || || ||| |||| ||||| | ||||| || ||||| || Sbjct 27268236 TGCTTCATGTCCGACTGCACCACCGGGTCTCCGAACTTGCGGCCGATCAGCCGCTTCGCG 27268295 Query 7955 TCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGA 8014 || || || ||||| | ||||||| || |||||||| ||||| || ||||| || Sbjct 27268296 TCGAACACCGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGCCGCATCYCCGATGAGC 27268355 Query 8015 CGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTC 8074 || || || || || || || ||||| ||||| || || || || |||||||| Sbjct 27268356 CGCTCGGTA---TCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTG 27268412 Query 8075 GCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAA 8134 || || || || || | ||| || | || || ||||| || || || || || | Sbjct 27268413 GCGATGATCTCCACCTTGCCGTGCTGGAACACCCCTACGCAGGAGTAGGTGGTGCCCAGG 27268472 Query 8135 TCAATACCGATTGC 8148 || || ||||| || Sbjct 27268473 TCGATGCCGATAGC 27268486 >seq10 Length=106310653 Score = 264 bits (292), Expect = 1e-65 Identities = 825/1266 (65%), Gaps = 26/1266 (2%) Strand=Plus/Minus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || || || | ||| ||||| | || || || |||| || Sbjct 78806541 GGGATCGTGGTGTTCCTTTTGATGAGCGGAGTCATGACGCCGCCAGCCGTCTCGATGCCC 78806482 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015 || |||| || |||||||| | || | |||||| || ||| ||| | ||| ||| Sbjct 78806481 AGGGACAACGGGGTCACGTCGAGTAGCAGCAGGTCCTGTACA--TTCTCTGACTTGTCCC 78806424 Query 7016 GT-TAAGA-TGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCG 7073 | ||| |||| || || |||| || ||||| || |||||||| |||||||| || Sbjct 78806423 CAATGAGAATGGCCGCCTGCACCGCGGCTCCGTAGGCCACCGCCTCGTCGGGGTTGATGC 78806364 Query 7074 TTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTC 7133 | || || || || || || || || ||||| | || | || || || ||||| | Sbjct 78806363 TCTTGTTGAGCTCCTTGCCATTGAAGAAATCCTGCAGCAGCTTCTGGATCTTGGGGATGC 78806304 Query 7134 GTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTC 7193 | || || || || |||| ||||| || | | | || || | ||| | || | Sbjct 78806303 GAGTGGAGCCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCCAGCTTGGCATCGC 78806244 Query 7194 GAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCT 7250 | || | || || || || |||| ||| ||||| | ||| || |||| Sbjct 78806243 GCAGAGCCTTCTCCACCGGCTCCAGGGTACCG---CGGAAAAGGTCGGCGTTGAGCTCCT 78806187 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || || ||||| ||||| || |||||||| ||||| ||||| | ||| || || | Sbjct 78806186 CGAAGCGAGCGCGGGTGATGGAAGTGTAGAAATCCACGCCCTCGTAGAGCGAGTCGATCT 78806127 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | ||| | | || | | ||| | || ||||| |||||||| || || || || | Sbjct 78806126 CGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCGGA 78806067 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 || || | || ||| ||| | ||| || ||||| || || ||||| ||||| | Sbjct 78806066 GTCGCCGCACCGCGCGCTTGTTGGGTGCAATGTCCTTCTTGTGCTTGCGTTTGAACTCCT 78806007 Query 7431 CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCG 7490 | | | ||| | | | | |||||| || || || |||| || || || || | Sbjct 78806006 CCGCCAGGTGGCTCACCATGCGGTTATCGAAGTCCTCCCCGCCCAGATGAGTGTCACCAG 78805947 Query 7491 CGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTAC 7550 | || | || || || ||||| || | || ||| | | | || || || || || | Sbjct 78805946 CCGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGTGC 78805887 Query 7551 CACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGA 7604 | || |||||||| |||||||| |||||| | ||| | | | ||||| || | Sbjct 78805886 CGCCGCCCAGGTCGAAAATGAGCACGTTCTTCTCGCCTCCCGCGCAGCCCTTCTTGTCCA 78805827 Query 7605 GACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAG 7664 ||||||| || || ||||||||||| || || || || || || || ||| ||||| | Sbjct 78805826 GACCGTAGGCAATGGCCGCCGCCGTGGGCTCGTTGATGATGCGCAGTACGTTGAGGCCCG 78805767 Query 7665 CAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCG 7724 ||| || |||| || || || || || || ||||| || || || ||||||||||| | Sbjct 78805766 TAATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCATTGAAATAGGCCGGGACGG 78805707 Query 7725 TTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGG 7784 | | ||||||| | || || || || || | ||| ||||| || |||||||| | Sbjct 78805706 TGATGACCGCGCTCTGCACCTTGCCCCCCAGGTAGGCTTCGGCGATCTCCTTCATTTTAG 78805647 Query 7785 TAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCA 7843 | || ||||| || || ||||| || | | | | || || | || || || | || Sbjct 78805646 TGAGGACCATGGAGGAGATCTCCTC-GGGGAAGAAGGTCTTGATCTCTCCTTTGTACTCC 78805588 Query 7844 ACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATA 7903 || | | |||| || | | | || | ||| ||| ||| | |||||| Sbjct 78805587 ACCTGCACTTTGGGCTT---CCCTCCCTCGCTCACCACCCGGAACGGCCAGTGTTTCATG 78805531 Query 7904 TCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962 || || | |||| | |||| ||||| | || || || | ||| || || || | Sbjct 78805530 TCTGACTGCA-CTGTGGCGTCCTCGAACTTCCGACCAATCAGCCTCTTGGCGTCGAAGAT 78805472 Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATT 8022 ||||| ||||||||||||| |||||||| || || || ||||| || || || Sbjct 78805471 GGTGTTGGTGGGGTTCATGGCCACCTGGTTCTTGGCTGCATCGCCGATGAGGCGCTC--- 78805415 Query 8023 ATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 | || || || || ||||| ||||| || || || || |||||||| || || || Sbjct 78805414 GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTACGGTTGCCCTGGTCGTTGGCGATGAT 78805355 Query 8083 TTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || || | | | ||| |||| || |||||||| || || || || | || || || Sbjct 78805354 CTCCACTTTGCCATGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCC 78805295 Query 8143 GATTGC 8148 || || Sbjct 78805294 AATAGC 78805289 >seq15 Length=84800079 Score = 212 bits (234), Expect = 8e-50 Identities = 370/539 (69%), Gaps = 0/539 (0%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || ||||| || |||||||| ||||| || | |||||||||||||| ||||| || Sbjct 32467448 GCACCATATGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTCCCGTTGAAG 32467507 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | | || ||||| || ||||| || || || ||||| ||||| || || Sbjct 32467508 AAGTCCTGGAGAAGTTTCTGAATCTTGGGGATACGGGTTGAGCCACCAACCAAGACAATA 32467567 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | || | || | ||| | ||| || ||||| |||| Sbjct 32467568 TCATGAATCTGAGACTTGTCCAGTTTGGCATCCCTAAGGGCTTTCTCCACAGGGTCCAGG 32467627 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||||||| | || ||| ||||| || ||||||||||| || |||||| Sbjct 32467628 GTGCCACGGAACAAGTCAGCATTCAATTCTTCAAATCGGGCACGGGTAATAGAGGTATAG 32467687 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || || | |||||||| ||||| | | || | | ||||| | Sbjct 32467688 AAGTCGATTCCTTCATAGAGGGAATCAATCTCAATACTGGCCTGGGTGCTGGAAGAGAGA 32467747 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || |||||||| || || || | ||||| | || | | ||| | Sbjct 32467748 GTGCGCTTAGCACGCTCACAAGCAGTACGGAGGCGACGGACAGCCCTCTTGTTTTCACTG 32467807 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 ||||| ||||| |||||||| || ||||| || || || || | | || Sbjct 32467808 ATATCCTTCTTGTGTTTACGCTTGAACTCCGCAATAAAATGGTTAACCATGCGGTTGTCA 32467867 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| ||||| || || || | |||||| |||||||| || | Sbjct 32467868 AAGTCTTCTCCACCCAAGTGAGTATCTCCAGCTGTAGATTTGACCTCAAAGATTCCATCC 32467927 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||||| | | | || |||||||| || ||||| || | ||||| || || ||||| Sbjct 32467928 TCAATAGTGAGGATTGACACATCAAAAGTGCCACCMCCTAAATCAAAGATCAGCACGTT 32467986 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 || || || ||||| || || ||||| ||||| || || ||||| ||| || |||||| Sbjct 32468098 CCATAGGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCGAAGTACGTTGAGACCAGCA 32468157 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 |||||| | |||||||| || || || || || || || ||||| ||||| || || || Sbjct 32468158 ATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTAAAATAGGCAGGTACTGTG 32468217 Query 7727 ACGACCGCGT 7736 ||||| |||| Sbjct 32468218 ACGACAGCGT 32468227 >seq6 Length=122646612 Score = 179 bits (198), Expect = 5e-40 Identities = 973/1552 (63%), Gaps = 56/1552 (4%) Strand=Plus/Minus Query 6551 ACCTTTTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTT 6610 ||||| ||| | ||| | |||||| |||| |||||||| || ||||| ||||||| | Sbjct 89912058 ACCTTATTCTGCTGCTTCTTGTCTTCAGCTTTGTACTTTTCTGCTTCTTGAACCATCTGT 89911999 Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 |||||||| || || || | ||||| ||||| || || |||||||| | || Sbjct 89911998 TCAATGTCATCCTTGCTCAAACGGCCCTTGTCATTAGTGATGGTAATCTTGTTCTCTTAT 89911939 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | |||||| |||| ||||| | ||| ||| | ||||||| ||| || | Sbjct 89911938 CCTGTGCTCTTATCCATAGCAAAGACATTGAGAATGCCAYTGGCATCAATATCAAAAGTG 89911879 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||| || | || | || || | || || || || | ||||| | ||| Sbjct 89911878 ACTTCAATCTGAGAAACACTACAGGG-GCAGGAGGTATGCCTGTGAGTTCAAACTTGCCA 89911820 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || || |||||||| | | | | | | ||||||||||| || | ||| || || Sbjct 89911819 AGCAAGTTGTTATCCTTGGTCATGGTTCACTCACCTTCATAAACCTGAATGAGAACACCA 89911760 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || || || || | ||| | || | ||| | ||||| || |||| Sbjct 89911759 GGCTGGTTGTCAGAGTAGGTGGTGAAAGTCTGCGTCTGCTTGGTAGGAATAGTGRTATTG 89911700 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | | || |||| | ||||| |||||| | |||||| || || || || Sbjct 89911699 TGCTTGAGGACAC---TCATGACTCCACCAGCAGTTTCAATTCCAAGGGAAAGGGGAGTG 89911643 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||| | || | || ||||| |||| ||| || || | || ||||| Sbjct 89911642 ACATCCGACAGCAGCAAGTCTTRAACATTTTCAGRTTTGTCTCCAGACAAAATGGCTAYC 89911583 Query 7031 TGGACCGTCGCC----------CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||| || || || ||||| | |||||| ||||||| || | ||||| Sbjct 89911582 TGGAATGTAGCATACAGCTGCACCATATGCAAGAGCCTCACCGGGGTTGATGCTCTTATT 89911523 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 ||||||||| || | || | ||| | | || ||||| || ||||| | || || Sbjct 89911522 CAGTTCTTTCCCACTGAAGAAGTCCTGGAGAAGTTTCTGAATCTTGGGGATGCRGGTTGA 89911463 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 ||||| ||||| || || || | | | || || || | ||| | || |||| | Sbjct 89911462 GCCACCCACCAAGACAATATCGTGGATCTGAGACTTGTCCAGCTTGGCATCCTGAAGGGC 89911403 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 || || | ||| ||| | |||||||||| | | || ||| ||||| | Sbjct 89911402 CTTCTCCATAGGGTCCCRGGTGCCATGGAACAAGTCAACATTCAATTCTTCAAATC---- 89911347 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 |||| | | || || || | |||||||| ||||| | | Sbjct 89911346 -----------------AGAAGTTGATTCCTTCATAGAGAGAATCAATCTCAATACTGGC 89911304 Query 7321 TTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 || | | ||||| | || ||||| || ||||| | || || || | | || | Sbjct 89911303 CTGGGTTCTGGAAGACAGAGTGCGCTTAGCAAGCTCAGAAGCAGTACGGAGGCAACAGAC 89911244 Query 7381 GGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG 7440 || | | ||| | ||||| ||||| ||||| | || |||||| || || || Sbjct 89911243 AGCCCTCTTGTTCTCACYGATATCCTTCTTGTGTTTGCTCTTGAACTCTGCAAGGACATG 89911184 Query 7441 -TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 | || | | | | || || ||||| ||| ||||| ||| || || | | | Sbjct 89911183 GTTGACCCTGCCATTG--TCAAAGTCTTCTCCAGACAAGT----ATCTCCAGCTATAGAT 89911130 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 || || ||||||| | | ||||| | | | || |||||||| | |||||||| Sbjct 89911129 TTAACCCCAAAGATTCYATCCTCAATAGTGAGGATTGACACATCAAAA-TGCCACCACCT 89911071 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 | ||||| || || || || | || | | || || || | || || || ||| Sbjct 89911070 AAATCAAAGATCAGCACATTTCTCTCTGCTCCAACMTTTTTGTCTAAGCCATAGGCAATA 89911011 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGC 7677 || || || ||||||||| | || || | ||| ||| || |||||||||||| || Sbjct 89911010 GCAGCAGCAGTTGGTTCACTGATGATTCTAAGTACACGG-AGACCAGCAATAGTTCTAGC 89910952 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 |||||| || || || || || || || ||||||||||| || || || || || | | Sbjct 89910951 ATCTTTGGTAGCCTGACGCTGAGAGTCATTAAAGTAGGCAGGTACTGTGACAACAGYRTT 89910892 Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 || || |||| || || | ||| || || |||||| | || | || ||||| || Sbjct 89910891 GGTAACAGTCTTCCCAAGGCAGACTTCTGCAATTTCTTTCCTCTT-TTCAGGACCATGGA 89910833 Query 7798 TGAAATCTCTTC-AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGG 7856 ||| ||||| || | ||||| ||| || || || || | || |||| || | | | Sbjct 89910832 TGACATCTCCTCTGGATAAAAACTCTTT-GTCTCTCCYTTGTATTCTACTTAAACCTTAG 89910774 Query 7857 GTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT 7916 || | | ||| || | ||| | | | ||||| ||||||| | ||||| Sbjct 89910773 GTCTGCCAGCATCATTTG---CCACCATGAAGGGCCAATGTTTCATAACAGACTGGACAA 89910717 Query 7917 GTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGT 7976 || ||| ||| ||| |||| | || ||||||||||| ||||| |||| | Sbjct 89910716 CAGCATCATCAAATCTTCATCCAGTAAGTTGTTTGGCATCAAAAACCGTGTTGGTGGGAT 89910657 Query 7977 TCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACG 8036 |||| | ||||||||| || || || || || | ||| | | | ||||| Sbjct 89910656 TCATTGYGACTTGGTTCTTTGCAGCATCACCAATCAATCGT---CTGGTGTTAGTAAAGA 89910600 Query 8037 CGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 ||| || |||||| |||| | |||| || || || ||||| ||||| || Sbjct 89910599 TGACATAGCTTGGGGTGGTTC-AGTCCCCTGATCATTGGCAATTATTTCCAC 89910549 >seq3 Length=127865068 Score = 179 bits (198), Expect = 5e-40 Identities = 592/921 (64%), Gaps = 0/921 (0%) Strand=Plus/Plus Query 6889 CTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948 ||| | ||| || || | ||| ||| | || | | ||||| | ||||| || || Sbjct 8749453 CTTGGTTGGGATAGTGGCATTCCTCTGGATCAGTGTAGTCATCACCCCACCAGCTGTCTC 8749512 Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCC 7008 || || || ||||| || | ||| |||| || | || ||||| || || | Sbjct 8749513 CAGCCCCAGGGACAGGGGAGCCACATCCAGCAGCAGAAGATCTTGCACCTTCTCACACGT 8749572 Query 7009 TTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTT 7068 || ||| | || | ||| || || || | ||||| || || || || ||||| ||||| Sbjct 8749573 GTCCCCCATCAATACGGCTGCCTGCACAGCAGCCCCATAAGCCACAGCTTCATCCGGGTT 8749632 Query 7069 AATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGG 7128 || |||| ||||| || | || | || | ||| | | | || | || || Sbjct 8749633 GATGCTTTTGTTCAGCTCCCTGCCATYGAAGAAGTCCTGCAGGAGCTTCTGTACCTTGGG 8749692 Query 7129 GATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGA 7188 |||||| || || ||||| |||| || || |||| | | | || | | ||| | Sbjct 8749693 GATTCGGGTAGAGCCACCCACCAGGACAATGTCATGGATCTGGGCCTTGCCCAGCTTGGC 8749752 Query 7189 GTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248 || || | | || || || || |||| | || || | |||| |||||||| Sbjct 8749753 ATCGCGCAAGGCCTTCTCTACCGGCTCCAGGGTGCTGCGAAAGAGGTCCGAGCACAGTTC 8749812 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||||| || || || || || || || ||||| || || || || | | ||||| || Sbjct 8749813 TTCAAAGCGGGCTCGAGTGATAGAAGTGTAGAAGTCTACACCCTCAAACAGGGAATCGAT 8749872 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || | || | || | | || || | || ||||| |||||||| || ||||| || Sbjct 8749873 CTCCAGAGTGGCCTGGGTACTGGACGACAGGGTGCGCTTGGCGCGCTCGCAGGCCGTGCG 8749932 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | | || ||||| ||| ||| | | | ||| || ||| || || ||||| Sbjct 8749933 GAGCCTGCGCAGGGCCCGCTTGTTCCTGCTCAAATCCTTGCCATGCTTCCGCCGGAACTC 8749992 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 || |||||| | || | ||||| || || ||||||| ||| || || || Sbjct 8749993 CTCCATGAAGTGGTTCACCAGCCGGTTGTCGAAGTCCTCTCCACCCAGGTGAGTGTCTCC 8750052 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || || || || ||||||| ||| | || ||| | | | ||| || || || || Sbjct 8750053 AGCCGTGGCCTTCACCTCAAAGACACCAGCGTCGATGGTGAGGACCGACACGTCGAAGGT 8750112 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 || ||||||||||| |||||||| ||||| || || | | || || || Sbjct 8750113 GCCCCCACCCAGGTCGAAAATGAGCACGTTGCGCTCTCCGGCGCCCAGCCGGTCCAGGCC 8750172 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| ||||| || || ||||| || || || || || | || ||| || || || || Sbjct 8750173 GTAGGCGATGGCAGCTGCCGTGGGCTCGTTGATGATYCTCAGGACGTTGAGCCCYGCGAT 8750232 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | |||| || || || || || || ||||| ||||| |||||||| || ||||| | Sbjct 8750233 GGCACCCGCGTCCTTAGTGGCCTGACGCTGCGAGTCGTTGAAGTAGGCAGGCACCGTGAT 8750292 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 || |||| | | || || || || |||| ||||| | || ||||| ||| | || Sbjct 8750293 TACAGCGTGCTTCACGGGCTGGCCCAGGTACGCCTCCGCCGTCTCCTTCATCTTGCTCAG 8750352 Query 7789 AACCATCGATGAAATCTCTTC 7809 ||||| || || ||||| || Sbjct 8750353 CACCATGGACGAGATCTCCTC 8750373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132545946880