Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq25 167 7e-37 >seq25 Length=44044299 Score = 167 bits (184), Expect = 7e-37 Identities = 137/164 (84%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 6830 TGCATTCTTGATGCTGATGCCCAGCGCGAAGGTATCAATGCCTCGACACGCTACCCGAAA 6889 ||| ||||||||||||||||| ||||| || | | || || ||||||||||||| Sbjct 10116243 TGCCTTCTTGATGCTGATGCCGAGCGCTAAAATCTATTTGTGTCTGAACGCTACCCGAAA 10116302 Query 6890 AACTGG-GTGCAGTCGGGGGATCCGGCGCGCGAATTCACCATGATTCAGTCAGCTCCGCT 6948 | |||| |||| |||||||||||| |||| |||||| ||| |||| |||||| ||||| Sbjct 10116303 ATCTGGTCTGCA-ACGGGGGATCCGGAGCGCAAATTCAACATAATTCTGTCAGCACCGCT 10116361 Query 6949 GATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGG 6992 |||||||||||| |||||||||||||||||||||||| |||||| Sbjct 10116362 GATGCTGCTGCCTGACCCTGACGCATTCGTCTCCGTCTAACTGG 10116405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145049544881152