Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20indicus_20[refseq_20GCF_5F000247795.1_202014-11-25] 32 sequences; 2,673,965,444 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 187 6e-42 seq19 181 2e-40 seq17 172 1e-37 seq3 145 2e-29 seq12 127 5e-24 seq1 123 6e-23 seq11 87.8 4e-12 seq2 86.0 1e-11 >seq8 Length=116941312 Score = 187 bits (206), Expect = 6e-42 Identities = 176/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | || || |||||||| ||||| ||||| ||||| || || | | || Sbjct 110779573 ACGAAGTCTCAACACTAGATGAAGAGTAGACTCCTTTTGCATGTTGTAGTCAGACAAAGT 110779514 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||| |||||||| || ||||| || | ||| ||||||||||||| ||| Sbjct 110779513 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 110779454 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| || || ||||| | || || ||| ||||||||||| Sbjct 110779453 TTCCTTATCCTGGATCTTGGCYTTTACATTTTCTACTGTATCCGAGGGCTCAACCTCGAG 110779394 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 110779393 AGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATCTT 110779349 >seq19 Length=65317831 Score = 181 bits (200), Expect = 2e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| | ||| || | |||||| Sbjct 34141194 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 34141253 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 34141254 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 34141313 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 34141314 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 34141373 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || || || || || | ||||||||| Sbjct 34141374 TTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 34141408 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| | ||| || | |||||| Sbjct 34140738 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 34140797 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 34140798 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 34140857 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 34140858 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 34140917 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 34140918 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 34140949 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| | ||| || | |||||| Sbjct 34140510 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 34140569 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 34140570 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 34140629 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || || || || ||||| ||| Sbjct 34140630 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACATCCAGGGTGATGGTC 34140689 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 34140690 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 34140721 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| | ||| || | |||||| Sbjct 34140966 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 34141025 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||| || |||| || ||||| ||| Sbjct 34141026 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCC 34141085 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || || || || ||||| ||| Sbjct 34141086 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 34141145 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 34141146 TTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 34141177 >seq17 Length=76519027 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| ||| || | || ||| Sbjct 55474403 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAAAAAGAGTGCGGCCGTCT 55474344 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || |||||||| |||| |||||||| ||| Sbjct 55474343 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 55474284 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 55474283 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 55474224 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || || || || || | ||||||||| Sbjct 55474223 TTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 55474189 Score = 152 bits (168), Expect = 1e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | |||||| Sbjct 53719104 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 53719045 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | ||||| || || Sbjct 53719044 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCT 53718985 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || |||||||||||| | || ||||| |||||||| || Sbjct 53718984 TGTATCTTCCCCTTGACRTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTT 53718925 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| ||||| | ||||||| Sbjct 53718924 TTACCAGTGAGGGTCTTCACAAAGATCTGCATT 53718892 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53720016 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 53719957 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53719956 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53719897 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| |||||||| ||| Sbjct 53719896 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 53719837 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53719836 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53719805 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53720700 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 53720641 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53720640 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53720581 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| |||||||| ||| Sbjct 53720580 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 53720521 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53720520 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53720489 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53719332 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 53719273 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53719272 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53719213 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 53719212 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 53719153 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53719152 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53719121 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53719560 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 53719501 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53719500 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53719441 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 53719440 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 53719381 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53719380 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53719349 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53719788 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 53719729 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53719728 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53719669 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 53719668 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 53719609 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53719608 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53719577 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53720472 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 53720413 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53720412 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53720353 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 53720352 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 53720293 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53720292 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53720261 Score = 147 bits (162), Expect = 5e-30 Identities = 158/206 (77%), Gaps = 5/206 (2%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || ||||| |||||||||||||| ||||| ||| |||| | ||| | Sbjct 42721478 ACGAAGTCTCAGTACAAGATGAAGAGTGGACTCCTTTTGAATGCTATAGACA--AAG--T 42721423 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||| ||| | || || ||||| || | || ||||||||||||| ||| Sbjct 42721422 ACATCCATCTTTCAGTTGCCTCCCAGCAAAGATCAGTCYTTTCTGGTCAGGAGGAATTCC 42721363 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||| ||| || || ||||| ||||| || ||| || |||| ||| Sbjct 42721362 TTCCTTATCCTGGACCTTGACCTTTACATTTTCTATGGTATCCGAGGGCTCGACCT-GAG 42721304 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCT 211098 |||||| ||||| ||| | || |||| Sbjct 42721303 AGTGATGGTCTTCCCCATCAGGGTCT 42721278 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||||| | |||||| Sbjct 53720244 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 53720185 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53720184 TCCAGCTGTTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53720125 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 53720124 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 53720065 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53720064 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53720033 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| |||||||||||||| |||||||| || || | ||||| | |||||| Sbjct 53720928 AGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 53720869 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || || ||||| || | || ||||| || || | || || ||||| Sbjct 53720868 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 53720809 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 53720808 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 53720749 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 53720748 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 53720717 Score = 98.7 bits (108), Expect = 2e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||| || || |||||||| |||||||| ||||| | ||| || |||||| Sbjct 29538440 AGGACCAGGTACAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 29538499 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 |||||||||||||| || ||||| || | ||| |||||||| |||| |||| Sbjct 29538500 TCCAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCAGGGGGAATGCCTT 29538551 >seq3 Length=127865068 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 || |||||| || || |||||||||||||| ||||| ||||| || || | | || Sbjct 21608362 ACAAAGTCTCCACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 21608303 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 |||||||| || |||||||| || ||||| || | ||| ||||||||||||| || Sbjct 21608302 ATGTCCATCTTTGAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCT 21608243 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| | ||||||||| || || ||||| || || || ||| || |||||||| Sbjct 21608242 TTCCTTATTCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGCTCGACCTCGAG 21608183 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||| | || || | |||||||| || || | |||||| || Sbjct 21608182 AGTGATGATGTTCCCTATCAGAGTCTTCACGAAAATCTGCATCTT 21608138 >seq12 Length=85442668 Score = 127 bits (140), Expect = 5e-24 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| | ||| || | |||||| Sbjct 3919884 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3919943 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || ||||||||||||| |||||||| ||| Sbjct 3919944 TCCAGCTGCTTGCCGGCAAAGATGAGCTTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 3920003 Query 211023 TGGATCTT 211030 |||||||| Sbjct 3920004 TGGATCTT 3920011 >seq1 Length=161108492 Score = 123 bits (136), Expect = 6e-23 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||||| |||||||| || ||||| || | ||| ||||||||||||| |||||| Sbjct 47266964 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 47267023 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||| ||||||||||| || || ||||| | || || ||| || |||| || ||| Sbjct 47267024 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGCTCCACCTTGACAGT 47267083 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| ||||| | || || ||||| | || | |||||| || Sbjct 47267084 GATGGTCTTCACTGTCAGRGTCTTCATGAAAATCTGCATCTT 47267125 >seq11 Length=110256634 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/126 (76%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 210991 GTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGG 211050 |||| |||||| ||||||| |||||||| ||||||||||| | ||||| ||||| || | Sbjct 49650506 GTTGCTGGTCAAGAGGAACACCTTCCTTATCCTGGATCTTGGGCTTCACATTTTCTATTG 49650565 Query 211051 TGTC--AGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACAC 211108 | || || |||| |||| ||||| ||| |||| || || || ||||| | || | Sbjct 49650566 TATCCAAGGGCTT--GACCTTGAGAGAGATGCTCTTCCCTGTCAGGGTCTTCATGAAAAT 49650623 Query 211109 CTGCAT 211114 |||||| Sbjct 49650624 CTGCAT 49650629 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 210908 AAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAG 210967 ||||| |||||||||||| ||||| || | || || || || | ||||||||||| Sbjct 22618990 AAGGTAAAGAGTGGACTCCTTTTGCAT--TGTAGTCA-CA---GTACATCCATCTTCCAK 22618937 Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027 |||||| | || |||| |||| ||| || ||||||| ||||| || || ||||| Sbjct 22618936 TTGCTTGGCAGCAAAGACCAGGCTTTGCCCATCRGGAGGAATTCCTTTGTTATCTTGGAT 22618877 Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 ||| || | ||||| | | || ||| || || ||| ||||||| | ||| | Sbjct 22618876 CTTGGCCTTTATATTTTCTGTTGCATCCGAGGGTTTGACTTCGGGAGTGATGGACTTCCT 22618817 Query 211088 CGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| | || | |||||| || Sbjct 22618816 TGTCAGGGTCTTCATGAAAATCTGCATCTT 22618787 >seq2 Length=140680885 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| ||||| || || || | || || | |||| Sbjct 101453722 AGCACCATGTGCAGGGTGGACTCTTTCTGGATATTGTATTCTGACAGAGTGCAGCCATTC 101453663 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| |||| | || || || | ||||||||||| || | || |||||||| Sbjct 101453662 TCCAGCTGTGTGCCCACAAAAATCAGATGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCT 101453603 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| | ||| || || || |||||||| || | ||| || || || ||| Sbjct 101453602 TGGATTATAGCTTTGACATTCTCAGTGGTGTCA---CT---AGGCTCAAGGGTAATGGTC 101453549 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||| || ||||| | ||| | |||||| Sbjct 101453548 TTGCCCACTAGGGTCTTCATAAAGATCTGCAT 101453517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151524747680