Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1461 271 9e-68 seq1234 190 2e-43 seq494 141 1e-28 >seq1461 Length=819661 Score = 271 bits (300), Expect = 9e-68 Identities = 584/863 (68%), Gaps = 14/863 (2%) Strand=Plus/Plus Query 9506 TGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCA 9565 || ||||||| | | |||||| | || ||| || |||| | | || | | | | Sbjct 359121 TGCTGGGCAACGTGGTGGTGGTGGTGATACTCACAAAGTACAAGCGGCTCCGGATCATGA 359180 Query 9566 CTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCAT 9625 | ||||| | ||| | ||| |||| || ||||| |||| || || || || |||||| Sbjct 359181 CCAACATCTACCTGCTCAACCTGGCCATTTCTGATGTGCTCTTCCTATTCACACTGCCAT 359240 Query 9626 TTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAAC 9685 | ||||| |||||| || | || | | || ||| ||||| | ||||||| Sbjct 359241 TCTGGATTCACTATGTTAGG-TGGAAC--GAGTGGGTGTTTGGCCACCGCATGTGTAAGT 359297 Query 9686 TGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 9745 ||||| || | | ||||||| ||||||| || |||||| ||||||||| | | Sbjct 359298 TGCTCTCCGGGCTCTATTACATGGGCTTGTACAGTGAGATCTTTTTCATCATCCTCTTGA 359357 Query 9746 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGT 9803 | ||||| ||||||| || | ||| | || || ||| || ||| | ||||| Sbjct 359358 CCATAGACCGGTATCTTGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACAGT 359415 Query 9804 AACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCC 9863 || | ||| || |||||| | | | |||||| | ||||||||| | ||||||| Sbjct 359416 CACTTTTGGTATTGTTACCAGCATCTTCACCTGGGTCCTGGCAGGGCTAGCAGCCCTCCC 359475 Query 9864 TGAATTTTTCTTTCATG-GACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACT 9922 ||||||||||||||||| ||| |||||| || ||| | | || |||| | Sbjct 359476 TGAATTTTTCTTTCATGAGAC-CCAAGAGGAGGCTGGACAGACTTTCTGCAGTCCTCTTT 359534 Query 9923 ACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAA 9982 |||||||| | ||||| |||| ||| ||| | | | ||| ||| | Sbjct 359535 ACCCAGAGGATAATGAAAATGCCTGGAAGCGATTCCATGCTCTGAGAATGAATATCCTGG 359594 Query 9983 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 10042 ||||| | |||||||||| ||||| | ||||||| | | |||||| | || |||| Sbjct 359595 GTCTCGCTCTGCCTCTGCTTGTTATGACCATCTGCTATTCAGGAATTATTAAAACACTGC 359654 Query 10043 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 10102 |||| ||||||| || || || || || ||||| | || || ||||| || ||||||| Sbjct 359655 TGAGATGCCCCAGTAAAAAAAAATATAAAGCCATTCGACTTATTTTTGTAATTATGGTGG 359714 Query 10103 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 10162 || ||| |||| |||||||||||||| | ||| ||||||| | | | ||||| || Sbjct 359715 TCTTCTTTATTTTCTGGACACCCTACAATCTGGTTGTCCTACTCTTTGCTTTTCA---AA 359771 Query 10163 CCCTTCTTAA-CCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 10221 | | || ||| | |||| | |||||| | ||||| |||| ||||| | ||| Sbjct 359772 TGCACTTGAAGGCTG-ATTGTGAACAGAGCAGACAGCTGGACCTGGCCATGCTGGTGACA 359830 Query 10222 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 10281 | | |||||||| ||||| || ||||||| |||||||| || ||||| || ||| Sbjct 359831 GAGGTGATCGCCTACACGCACTGCTGTGTCAACCCCGTGATCTATGCCTTCGTTGGTGAG 359890 Query 10282 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 10341 | ||| | | ||||| |||||| ||||||| || |||||| |||||| | || Sbjct 359891 AGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGATATATGGCCACCTACCTGGGAAAA 359950 Query 10342 TACATCCCCTTCCTGTCTGGTGA 10364 | ||| || || || || |||| Sbjct 359951 TTCATGCCATTTCTTCCTAGTGA 359973 Score = 271 bits (300), Expect = 9e-68 Identities = 584/863 (68%), Gaps = 14/863 (2%) Strand=Plus/Plus Query 176392 TGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCA 176451 || ||||||| | | |||||| | || ||| || |||| | | || | | | | Sbjct 359121 TGCTGGGCAACGTGGTGGTGGTGGTGATACTCACAAAGTACAAGCGGCTCCGGATCATGA 359180 Query 176452 CTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCAT 176511 | ||||| | ||| | ||| |||| || ||||| |||| || || || || |||||| Sbjct 359181 CCAACATCTACCTGCTCAACCTGGCCATTTCTGATGTGCTCTTCCTATTCACACTGCCAT 359240 Query 176512 TTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAAC 176571 | ||||| |||||| || | || | | || ||| ||||| | ||||||| Sbjct 359241 TCTGGATTCACTATGTTAGG-TGGAAC--GAGTGGGTGTTTGGCCACCGCATGTGTAAGT 359297 Query 176572 TGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 176631 ||||| || | | ||||||| ||||||| || |||||| ||||||||| | | Sbjct 359298 TGCTCTCCGGGCTCTATTACATGGGCTTGTACAGTGAGATCTTTTTCATCATCCTCTTGA 359357 Query 176632 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGT 176689 | ||||| ||||||| || | ||| | || || ||| || ||| | ||||| Sbjct 359358 CCATAGACCGGTATCTTGCCATCGTCCACGCCGTGTTTGCCCTTCGAGCCC--GGACAGT 359415 Query 176690 AACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCC 176749 || | ||| || |||||| | | | |||||| | ||||||||| | ||||||| Sbjct 359416 CACTTTTGGTATTGTTACCAGCATCTTCACCTGGGTCCTGGCAGGGCTAGCAGCCCTCCC 359475 Query 176750 TGAATTTTTCTTTCATG-GACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACT 176808 ||||||||||||||||| ||| |||||| || ||| | | || |||| | Sbjct 359476 TGAATTTTTCTTTCATGAGAC-CCAAGAGGAGGCTGGACAGACTTTCTGCAGTCCTCTTT 359534 Query 176809 ACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAA 176868 |||||||| | ||||| |||| ||| ||| | | | ||| ||| | Sbjct 359535 ACCCAGAGGATAATGAAAATGCCTGGAAGCGATTCCATGCTCTGAGAATGAATATCCTGG 359594 Query 176869 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 176928 ||||| | |||||||||| ||||| | ||||||| | | |||||| | || |||| Sbjct 359595 GTCTCGCTCTGCCTCTGCTTGTTATGACCATCTGCTATTCAGGAATTATTAAAACACTGC 359654 Query 176929 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 176988 |||| ||||||| || || || || || ||||| | || || ||||| || ||||||| Sbjct 359655 TGAGATGCCCCAGTAAAAAAAAATATAAAGCCATTCGACTTATTTTTGTAATTATGGTGG 359714 Query 176989 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 177048 || ||| |||| |||||||||||||| | ||| ||||||| | | | ||||| || Sbjct 359715 TCTTCTTTATTTTCTGGACACCCTACAATCTGGTTGTCCTACTCTTTGCTTTTCA---AA 359771 Query 177049 CCCTTCTTAA-CCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 177107 | | || ||| | |||| | |||||| | ||||| |||| ||||| | ||| Sbjct 359772 TGCACTTGAAGGCTG-ATTGTGAACAGAGCAGACAGCTGGACCTGGCCATGCTGGTGACA 359830 Query 177108 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 177167 | | |||||||| ||||| || ||||||| |||||||| || ||||| || ||| Sbjct 359831 GAGGTGATCGCCTACACGCACTGCTGTGTCAACCCCGTGATCTATGCCTTCGTTGGTGAG 359890 Query 177168 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 177227 | ||| | | ||||| |||||| ||||||| || |||||| |||||| | || Sbjct 359891 AGGTTCCGGAAGCACCTCCGCCACTTTTTCCACAGATATATGGCCACCTACCTGGGAAAA 359950 Query 177228 TACATCCCCTTCCTGTCTGGTGA 177250 | ||| || || || || |||| Sbjct 359951 TTCATGCCATTTCTTCCTAGTGA 359973 Score = 105 bits (116), Expect = 8e-18 Identities = 241/357 (68%), Gaps = 13/357 (4%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | ||| |||||||| | | ||| || | || ||| | || | | Sbjct 465166 TGCCACTGCTTGTCATGATCGTCTGCTATTCGGGAATCATAAAAACCCTGCTCCGGTGTC 465225 Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 465226 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 465285 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 10167 || | || ||| | ||||||||||| || || || ||| ||||| || | | | || Sbjct 465286 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 465345 Query 10168 -CTT---AACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 10223 ||| | |||||||| || | | ||| ||||| || ||| | | ||| | Sbjct 465346 GCTTGAATAACTGCAGTG-GC-TCTAACAG---GCTGGACCAAGCCATGCAGGTGACAGA 465400 Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283 || | | || ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct 465401 GACCCTGGGGATGACGCACTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 465460 Query 10284 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 ||| ||| | || | | ||||||| | ||| | |||| | | ||||||| Sbjct 465461 GTTCCGAAACTATCTCTTACGGTTCTTCCGAAAGTACTTCGCCAGCCGCTTCTGCAA 465517 Score = 105 bits (116), Expect = 8e-18 Identities = 241/357 (68%), Gaps = 13/357 (4%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | ||| |||||||| | | ||| || | || ||| | || | | Sbjct 465166 TGCCACTGCTTGTCATGATCGTCTGCTATTCGGGAATCATAAAAACCCTGCTCCGGTGTC 465225 Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 465226 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 465285 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 177053 || | || ||| | ||||||||||| || || || ||| ||||| || | | | || Sbjct 465286 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 465345 Query 177054 -CTT---AACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 177109 ||| | |||||||| || | | ||| ||||| || ||| | | ||| | Sbjct 465346 GCTTGAATAACTGCAGTG-GC-TCTAACAG---GCTGGACCAAGCCATGCAGGTGACAGA 465400 Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169 || | | || ||||| ||||||||||| | |||||||| |||||||||||||| Sbjct 465401 GACCCTGGGGATGACGCACTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 465460 Query 177170 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 ||| ||| | || | | ||||||| | ||| | |||| | | ||||||| Sbjct 465461 GTTCCGAAACTATCTCTTACGGTTCTTCCGAAAGTACTTCGCCAGCCGCTTCTGCAA 465517 Score = 102 bits (112), Expect = 1e-16 Identities = 215/320 (67%), Gaps = 3/320 (1%) Strand=Plus/Minus Query 176346 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 176405 || ||| || | ||| || |||| | | |||||| || |||| || | ||||| ||| Sbjct 263038 GCCCAGCTGCTGCCCCCCTTGTACTCGGTGGTGTTTGTCATTGGCCTGATTGGCAACATC 262979 Query 176406 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 176465 | ||||| | | |||| ||||| || | |||||| | | || | ||| | || Sbjct 262978 CTGGTGGTCCTGGTCCTCATGCAATACAAGAGGCTCAAAAGCATGACCAGCATCTACCTC 262919 Query 176466 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 176525 | ||| |||| || |||||| | | || || || || |||| || ||||| |||| Sbjct 262918 CTCAACCTGGCCATTTCTGACCTCATCTTCCTCTTCACGCTGCCCTTCTGGATCGACTAC 262859 Query 176526 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 176585 | | || | |||| |||| ||| || | || ||||||| ||||| || | Sbjct 262858 AAGG---TGAAGGATGACTGGATTTTCGGAGATGCCATGTGTAAGTTGCTCTTTGGGTTC 262802 Query 176586 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 176645 | || | || |||||||| || |||| | |||||||||||| || | |||||||| Sbjct 262801 TTTTTCTTGGGCTTGTACAGCGAGATCTTCTTCATCATCCTGCTGACCATCGACAGGTAC 262742 Query 176646 CTAGCTGTTGTCTATGCTGT 176665 || || | ||| ||||||| Sbjct 262741 CTGGCCATCGTCCATGCTGT 262722 Score = 102 bits (112), Expect = 1e-16 Identities = 215/320 (67%), Gaps = 3/320 (1%) Strand=Plus/Minus Query 9460 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 9519 || ||| || | ||| || |||| | | |||||| || |||| || | ||||| ||| Sbjct 263038 GCCCAGCTGCTGCCCCCCTTGTACTCGGTGGTGTTTGTCATTGGCCTGATTGGCAACATC 262979 Query 9520 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 9579 | ||||| | | |||| ||||| || | |||||| | | || | ||| | || Sbjct 262978 CTGGTGGTCCTGGTCCTCATGCAATACAAGAGGCTCAAAAGCATGACCAGCATCTACCTC 262919 Query 9580 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 9639 | ||| |||| || |||||| | | || || || || |||| || ||||| |||| Sbjct 262918 CTCAACCTGGCCATTTCTGACCTCATCTTCCTCTTCACGCTGCCCTTCTGGATCGACTAC 262859 Query 9640 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 9699 | | || | |||| |||| ||| || | || ||||||| ||||| || | Sbjct 262858 AAGG---TGAAGGATGACTGGATTTTCGGAGATGCCATGTGTAAGTTGCTCTTTGGGTTC 262802 Query 9700 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 9759 | || | || |||||||| || |||| | |||||||||||| || | |||||||| Sbjct 262801 TTTTTCTTGGGCTTGTACAGCGAGATCTTCTTCATCATCCTGCTGACCATCGACAGGTAC 262742 Query 9760 CTAGCTGTTGTCTATGCTGT 9779 || || | ||| ||||||| Sbjct 262741 CTGGCCATCGTCCATGCTGT 262722 Score = 102 bits (112), Expect = 1e-16 Identities = 240/356 (67%), Gaps = 11/356 (3%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | ||| |||||||| | | ||| || | || ||| | || | | Sbjct 451087 TGCCACTGCTTGTCATGATCGTCTGCTATTCGGGAATCATAAAAACCCTGCTCCGGTGTC 451146 Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 451147 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 451206 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 10168 || | || ||| | ||||||||||| || || || ||| ||||| || | || || Sbjct 451207 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCA-GGAATTCT-- 451263 Query 10169 TTAACCTG---CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 10225 || |||| | ||| |||||| | ||||| || ||| | | ||| | | Sbjct 451264 TTGGCCTGAGTAACTGTAAGAGCAGCAGTCAGCTGGACCAAGCCATGCAGGTGACAGAGA 451323 Query 10226 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 10285 | | | || ||||| ||||||||||| | |||||||| || || |||||||||| Sbjct 451324 CCCTGGGGCTGACCCACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGGGAGAAGT 451383 Query 10286 TTAGAAGACACCTGTACCAC-TTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 | || || | || | |||| ||||||| | | | |||| |||||||||| Sbjct 451384 TCAGGAGGTATCTCT-CCACGTTCTTCCGAAAGCATATTGCCAAACACCTCTGCAA 451438 Score = 102 bits (112), Expect = 1e-16 Identities = 240/356 (67%), Gaps = 11/356 (3%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | ||| |||||||| | | ||| || | || ||| | || | | Sbjct 451087 TGCCACTGCTTGTCATGATCGTCTGCTATTCGGGAATCATAAAAACCCTGCTCCGGTGTC 451146 Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| | Sbjct 451147 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 451206 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 177054 || | || ||| | ||||||||||| || || || ||| ||||| || | || || Sbjct 451207 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCA-GGAATTCT-- 451263 Query 177055 TTAACCTG---CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 177111 || |||| | ||| |||||| | ||||| || ||| | | ||| | | Sbjct 451264 TTGGCCTGAGTAACTGTAAGAGCAGCAGTCAGCTGGACCAAGCCATGCAGGTGACAGAGA 451323 Query 177112 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 177171 | | | || ||||| ||||||||||| | |||||||| || || |||||||||| Sbjct 451324 CCCTGGGGCTGACCCACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGGGAGAAGT 451383 Query 177172 TTAGAAGACACCTGTACCAC-TTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 | || || | || | |||| ||||||| | | | |||| |||||||||| Sbjct 451384 TCAGGAGGTATCTCT-CCACGTTCTTCCGAAAGCATATTGCCAAACACCTCTGCAA 451438 >seq1234 Length=3407371 Score = 190 bits (210), Expect = 2e-43 Identities = 146/173 (84%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||| |||||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 3269135 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 3269076 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||||||||| |||||||||| ||||||||| | |||||| | || Sbjct 3269075 ACACCCAGGCCCATGTCCCCCGACCGCTGGTACAACTGGCAGGACAACTCCCCATTCACC 3269016 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||||| ||| |||||| || || ||||||||| ||||| || Sbjct 3269015 ACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATGAGAGGCAGATC 3268963 >seq494 Length=1389556 Score = 141 bits (156), Expect = 1e-28 Identities = 126/157 (80%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||| | || |||||| || ||||| |||||||| |||||||| | ||| Sbjct 770027 CAGCGCCGCAGCCGGAGCCGGAGGGTCTTCAGCTTCTCCCCCAGCGAGTTCACGTGCTCC 769968 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | | ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct 769967 TTGAT---GTCAGGCCCGTGGTTCTCAGCCTTTGGCATCACCTCTTCCAGGTAAAACTGG 769911 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||| || |||| ||| ||||| ||||||||||||| Sbjct 769910 ATCATTTCCGACAAGGCTTGGCAACCCAGGTAACCCT 769874 Score = 104 bits (114), Expect = 3e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 ||| |||| |||||| || |||| ||||| ||||||||||| ||||||||||||||||| Sbjct 772274 TCACTTTTGCATCTTCGTTGTCACGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTC 772215 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| || | || ||||||| Sbjct 772214 ACTCATGGCTTTGTAGACACCCCTCTCTTGGAGCT 772180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589772969455680