Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1227 147 2e-30 seq87 131 2e-25 seq3059 123 3e-23 seq4133 114 1e-20 seq2282 91.5 2e-13 seq2985 84.2 2e-11 seq2972 84.2 2e-11 seq1484 82.4 8e-11 >seq1227 Length=586938 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 13097 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 13038 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 13037 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 12979 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 12978 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 12919 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| | || ||||||| ||||| || Sbjct 12918 CATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTAAGGGGAGG 12871 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 13325 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 13266 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 13265 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 13207 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 13206 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 13147 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 13146 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 13099 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 13553 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 13494 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 13493 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 13435 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 13434 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 13375 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 13374 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 13327 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 13781 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 13722 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 13721 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 13663 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 13662 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 13603 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 13602 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 13555 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 14009 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 13950 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 13949 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 13891 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 13890 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 13831 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 13830 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 13783 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 14237 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 14178 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 14177 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 14119 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 14118 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 14059 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 14058 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 14011 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 14465 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 14406 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 14405 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 14347 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 14346 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 14287 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 14286 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 14239 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 14693 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 14634 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 14633 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 14575 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 14574 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 14515 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 14514 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 14467 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 14921 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 14862 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 14861 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 14803 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 14802 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 14743 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 14742 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 14695 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 15149 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 15090 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 15089 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 15031 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 15030 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 14971 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 14970 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 14923 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || ||| Sbjct 15377 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 15318 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 15317 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 15259 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 15258 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 15199 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 15198 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 15151 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || ||||| || ||||||||||| | || || || ||| Sbjct 15606 AATGCAGATCTTTGTGAAGACCCTCACTGGTAAAACCATCACTCTGGAGGTGGAGCCCAG 15547 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| || || | || ||||| ||||||||| | ||||| Sbjct 15546 TGACACCATCGAGAATGTCAAGGGGAAGATACAAGAAAAAGAAGGCATCCCCCCAGACCA 15487 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || ||||||||||| || | ||||||||| |||||||| Sbjct 15486 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 15427 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | || || || Sbjct 15426 CATCCAGAAGGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 15379 >seq87 Length=1745107 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| || || ||||| ||||||||| | || || || || Sbjct 606098 AAAATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 606039 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| || || | || || |||||||| ||| | || Sbjct 606038 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGA 605980 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | ||||||| || ||||| |||||||| || | ||||| || || || Sbjct 605979 CCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 605920 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| ||| | || ||||| || || | || ||||||| || Sbjct 605919 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 605869 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 605867 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 605808 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || || ||||| ||| | ||||| Sbjct 605807 GACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCA 605749 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || ||||| |||||||| || | ||||| || || ||||| Sbjct 605748 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 605689 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 605688 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGGC 605640 >seq3059 Length=469066 Score = 123 bits (136), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || ||||| ||||||||| | || || || || Sbjct 20324 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 20265 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| || || | || || || ||||| ||| | || Sbjct 20264 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGA 20206 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | ||||||| || ||||| |||||||| || | ||||| || || || Sbjct 20205 CCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 20146 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 20145 CAACATCCAGAAAGAGTCGACTCTGCACCTGGTCCTTCGTCTGAGGGGTGGC 20094 >seq4133 Length=1091651 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || |||| ||||||||| | || || || | Sbjct 881083 AAAATGCAGATCTTCGTGAAGACCCTGACCCGCAAGACCATCACCCTGGAGGTGGAGCCT 881142 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| || || | || || || ||||| ||| | || Sbjct 881143 AGTGACACCATTGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGA 881201 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | ||||||| || ||||| |||||||| || | ||||| || || || Sbjct 881202 CCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 881261 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 881262 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGGC 881313 >seq2282 Length=2065108 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| | |||| |||||||||||||||||| |||||||| | || | || | Sbjct 854342 TCAAGGCCAGGATTCAAGACAAAGAGGGCATCCCCCTAGACCAGCAGAGGCTGACCTTTG 854401 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | || |||||||| || || | | ||||||| || ||||||||||||| ||| ||| Sbjct 854402 CAGGGAAACAGCT-GAAGATGGGTGCACCCTGTCTGAATACAACATCCAGA--GAGTCCA 854458 Query 40886 CGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | ||||| | || ||| ||||||||| || Sbjct 854459 CTCTGCACTTGGTCCTGCACTTGAGGGGAGG 854489 >seq2985 Length=258859 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 || || || ||||| ||| | |||||||| | ||||||| || ||||| |||||||| Sbjct 227227 GATAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAA 227286 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| || || |||||||||||||| ||| | || ||||| || || | Sbjct 227287 GATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTC 227346 Query 40903 CGCTTGAGGGGCGG 40916 || ||||||| || Sbjct 227347 CGTCTGAGGGGTGG 227360 >seq2972 Length=388121 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| ||||| || || || || ||| |||||||||| || ||| || | ||||| | Sbjct 372660 TGGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCGTCGATATTCT 372719 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 ||||||||||||| || || ||||| ||||| || || ||| || || || ||| | Sbjct 372720 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAG 372779 Query 117162 ACGAGG 117167 |||||| Sbjct 372780 ACGAGG 372785 >seq1484 Length=2418587 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCAC-CGTCGACGTCGAAGC 40745 || ||||| || ||| | || || | | ||| || |||||||| | |||| || || | Sbjct 499714 AAGATGCAGATTTTCATGAAGACCCGGATGGGGAAGACCATCACTCTTCGAGGTTGAGCC 499655 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | || | || ||| | |||| || || | || || || || || || | || Sbjct 499654 CTCGGATACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 499595 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||| |||| |||| || ||||| || ||||| || | | || | ||||| Sbjct 499594 CCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTA 499535 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||| || |||||| | || || |||||||||||| Sbjct 499534 CAACATGCAAAAGGAGTCGACTCTTCATCTAGTGTTG 499498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514953913633920