Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq494 136 4e-27 >seq494 Length=1389556 Score = 136 bits (150), Expect = 4e-27 Identities = 119/148 (80%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || ||| |||| ||||||||||||||||||||||| || || | Sbjct 769874 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAAGAGGTGA 769933 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 ||||| ||||||| || || | || || ||| |||||||||||||| ||||| |||| Sbjct 769934 TGCCAAAGGCTGAGAACCACGGGCCTGACATCAAGGAGCACGTGAACTCGCTGGGGGAGA 769993 Query 10260 ATCTAAAGACCCTAAGGCTTCGCTTGCG 10287 | || |||||||| |||| || |||| Sbjct 769994 AGCTGAAGACCCTCCGGCTCCGGCTGCG 770021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547097354449920