Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2008 331 1e-85 seq1151 269 3e-67 seq4581 230 3e-55 seq906 215 7e-51 seq1033 212 8e-50 >seq2008 Length=369338 Score = 331 bits (366), Expect = 1e-85 Identities = 1032/1587 (65%), Gaps = 18/1587 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| |||| || ||||| ||||| | ||||| || || ||||| || Sbjct 365350 TCATCCTCAGCTTTGTATTTTTCAGCATCCAGAACCATGCGCTCGATCTCTTCCTTGCTC 365409 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| || ||||| | || || |||| | ||| || | Sbjct 365410 AGCCGGCCCTTGTCATTGGTAATGGTGATCTTGTTGGCCTTGCCCGTGCTCTTGTCCATA 365469 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || | ||||| | ||||||||| ||||| | || || | || | ||| || || Sbjct 365470 GCTGTGACATTGAGAATACCATTGGCATCGATGTCAAAGGTCACCTCAATCTGAGGCACT 365529 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 ||||| ||||| | || || || || | |||||| || || | |||| ||| Sbjct 365530 CCCCTGGGTGCAGGAGGGATTCCAGTCAGATCAAAGCGCCCCAGCAGGTTGTTGTCCCGA 365589 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | || || ||||| || | || ||| | || ||||| ||| Sbjct 365590 GTCATGGCCCTCTCGCCCTCATACACCTGGATCAGCACGCCCGGCTGATTGTCTGAATAG 365649 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || | ||| || ||| | ||| | || || || | || | | || | ||| Sbjct 365650 GTGGTGAAAATCTGTGTCTGCTTCGTGGGGATGGTGGAGTTGCGCTTGATTAATACAGTC 365709 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || ||| || | || | |||||| || | ||||||||| | | |||| Sbjct 365710 ATGACTCCCCCTGCAGTCTCCAACCCTAAAGACAGGGGAGCCACGTCCAACAAAAGCAGG 365769 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || || ||| | || ||| | || ||||| || || || | ||||| || Sbjct 365770 TCCTGTACCTTTTCAGACTTATCCCCCATCAAAATGGCTGCCTGAACTGCAGCCCCATAG 365829 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT 7108 || || |||||||||||||| || | || || || || ||| ||||| || ||| Sbjct 365830 GCAACTGCCTCATCGGGGTTGATGCTCTTGTTGAGATCACGACCATTAAAGTAGTCCTGC 365889 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 |||| |||| || |||||||| || || || || || || || || |||| | | Sbjct 365890 AACAGCCTCTGAACCTTAGGGATTCGCGTAGAGCCCCCTACTAAGACAATGTCATGGATT 365949 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTA 7225 || | |||||| ||||| | || ||||| | || || ||||| |||| | | || Sbjct 365950 TTAGCTTTATCCATCTTGGCATCCCGAAGAGCCTTCTCCACAGGCTCCAGGGTGCCCCTA 366009 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 |||| ||| ||||| || ||||| || || | ||| |||||||| ||||| ||| Sbjct 366010 ---AACAGGTCTGCACACAACTCTTCAAACCGGGCTCTGGTGATGGATGTGTAGAAGTCA 366066 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| || || | || |||||||| | | | | || | | || || | || | | Sbjct 366067 ATGCCTTCATAAAGTGAGTCAATTTCCAAGTTGGCCTGGGTGCTAGATGACAGGGTCCTC 366126 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | || || || || || || || | | || ||| ||| | || || Sbjct 366127 TTGGCCCTTTCGCAGGCAGTGCGCAACCGCCTCACAGCCCGCTTGTTCTGGCTGATGTCC 366186 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||||||||| | || |||||||| ||||| | | || || || ||||| Sbjct 366187 TTCTTATGTTTCCTCTTGAACTCTTCCACAAAGTGGCTCACAAGCCTGTTGTCAAAATCC 366246 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || ||||||||||| || ||||| || || || || || ||||| || || | || ||| Sbjct 366247 TCTCCACCCAAGTGGGTGTCCCCAGCTGTGGCCTTAACCTCAAAAATCCCATCATCTATG 366306 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TCG-TAT 7583 | | | || |||||||| || || |||||||| ||||| || | || | ||| | | Sbjct 366307 GTCAGGACGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAAGACATGTCGCTCT 366366 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | | | | ||||| | || || || || || || || || |||||||| |||| Sbjct 366367 CCCTGACCTGCT--TTATCTAAGCCATAGGCAATGGCAGCAGCAGTGGGTTCATTGATAA 366424 Query 7644 TACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | | || ||| || || || || ||| ||||||| || || || || ||||| || Sbjct 366425 TTCTTAGCACA-TTGAGACCTGCGATAACACCCGCATCCTTGGTGGCCTGGCGTTGAGAG 366483 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || |||||||| || || || | || || | ||||| | | || | | | | Sbjct 366484 TCATTGAAGTAGGCTGGCACAGTGATCACAGCATTGGTGACAGTGTAGCCCAAAAAAGCC 366543 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | || ||||| || || || ||||| || || || ||||||| ||| | Sbjct 366544 TCAGCAGTCTCCTTCATCTTAGTTAGTACCATAGAAGAGATTTCTTCAGGATAAAAAGCT 366603 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882 ||| |||| || ||| | || | | |||| || || | | | ||| || Sbjct 366604 TTCTTTTCCCCTTTATAGGACACCATTACCTTGGGCTT-GCCTC--CTTCATTGATTACT 366660 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942 | | | |||| ||||||||| ||| || | || ||| ||||| || || Sbjct 366661 TGGAAAGGCCAAAGTTTCATATCTGATTGCACGACAGGATCATTAAATTTTCTGCCTATC 366720 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 ||||| || |||||||| || ||||| | ||| ||||||||| |||||||| || || Sbjct 366721 AGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCTGCA 366780 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || ||||| || || ||| || || || || || ||||| ||||| || || || Sbjct 366781 TCGCCGATGAGCCGCTCAGTA---TCAGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTG 366837 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122 || |||||||| || || || || || | ||| ||| | || || || || || || Sbjct 366838 CCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGTTGGAACACCCCCACACAGGAGTAG 366897 Query 8123 GTTGTTCCTAAATCAATACCGATTGCT 8149 || || || | || || ||||| ||| Sbjct 366898 GTGGTGCCCAGGTCGATGCCGATAGCT 366924 >seq1151 Length=2060792 Score = 269 bits (298), Expect = 3e-67 Identities = 826/1266 (65%), Gaps = 26/1266 (2%) Strand=Plus/Plus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || || || | ||| ||||| | || || || |||| || Sbjct 1228001 GGGATCGTGGTGTTCCTTTTGATGAGCGGAGTCATGACGCCGCCAGCCGTCTCGATGCCC 1228060 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015 || |||| || |||||||| | || | |||||| || ||| ||| | ||| ||| Sbjct 1228061 AGGGACAACGGGGTCACGTCGAGTAGCAGCAGGTCCTGTACA--TTCTCTGACTTGTCCC 1228118 Query 7016 -GTTAAGA-TGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCG 7073 | | ||| |||| || || |||| || ||||| || |||||||| |||||||| || Sbjct 1228119 CGATGAGAATGGCCGCCTGCACCGCGGCTCCGTAGGCCACCGCCTCGTCGGGGTTGATGC 1228178 Query 7074 TTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTC 7133 | || || || || || || || || ||||| | || | || || || ||||| | Sbjct 1228179 TCTTGTTGAGCTCCTTGCCATTGAAGAAATCCTGCAGCAGCTTCTGGATCTTGGGGATGC 1228238 Query 7134 GTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTC 7193 | || || || || |||| ||||| || | | | || || | ||| | || | Sbjct 1228239 GAGTGGAGCCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCCAGCTTGGCATCGC 1228298 Query 7194 GAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCT 7250 | || | || || || || |||| ||| ||||| | ||| || |||| Sbjct 1228299 GCAGAGCCTTCTCCACCGGCTCCAGGGTACCG---CGGAAAAGGTCGGCGTTGAGCTCCT 1228355 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || || ||||| ||||| || |||||||| ||||| ||||| | ||| || || | Sbjct 1228356 CGAAGCGAGCGCGGGTGATGGACGTGTAGAAATCCACGCCCTCGTAGAGCGAGTCGATCT 1228415 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | ||| | | || | | ||| | || ||||| |||||||| || || || || | Sbjct 1228416 CGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCGGA 1228475 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 || || | || ||| ||| | ||| || ||||| || || ||||| ||||| | Sbjct 1228476 GTCGCCGCACCGCGCGCTTGTTGGGTGCAATGTCCTTCTTGTGCTTGCGTTTGAACTCCT 1228535 Query 7431 CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCG 7490 | | | ||| | | | | |||||| || || || |||| || || || || | Sbjct 1228536 CCGCCAGGTGGCTCACCATGCGGTTATCGAAGTCCTCCCCGCCCAGATGAGTGTCACCAG 1228595 Query 7491 CGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTAC 7550 | || | || || || ||||| || | || ||| | | | || || || || || | Sbjct 1228596 CCGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGTGC 1228655 Query 7551 CACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGA 7604 | || |||||||| |||||||| |||||| | ||| | | | ||||| || | Sbjct 1228656 CGCCGCCCAGGTCGAAAATGAGCACGTTCTTCTCGCCTCCCGCGCAGCCCTTCTTGTCCA 1228715 Query 7605 GACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAG 7664 ||||||| || || ||||||||||| || || || || || || || ||| ||||| | Sbjct 1228716 GACCGTAGGCAATGGCCGCCGCCGTGGGCTCGTTGATGATGCGCAGCACGTTGAGGCCCG 1228775 Query 7665 CAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCG 7724 ||| || |||| || || || || || || ||||| || || || ||||||||||| | Sbjct 1228776 TAATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCATTGAAATAGGCCGGGACGG 1228835 Query 7725 TTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGG 7784 | | ||||||| | || || || || || | ||| ||||| || |||||||| | Sbjct 1228836 TGATGACCGCGCTCTGCACCTTGCCCCCCAGGTAGGCTTCGGCGATCTCCTTCATTTTAG 1228895 Query 7785 TAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCA 7843 | || ||||| || || ||||| || | | | | || || | || || || | || Sbjct 1228896 TGAGGACCATGGAGGAGATCTCCTC-GGGGAAGAAGGTCTTGATCTCTCCTTTGTACTCC 1228954 Query 7844 ACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATA 7903 || | | |||| || | | | || | ||| ||| ||| | |||||| Sbjct 1228955 ACCTGCACTTTGGGCTT---CCCTCCCTCGCTCACCACCCGGAACGGCCAGTGTTTCATG 1229011 Query 7904 TCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962 || || | |||| | |||| ||||| | || || || | ||| || || || | Sbjct 1229012 TCTGACTGCA-CTGTGGCGTCCTCGAACTTCCGACCAATCAGCCTCTTGGCGTCGAAGAT 1229070 Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATT 8022 ||||| ||||||||||||| |||||||| || || || ||||| || || || Sbjct 1229071 GGTGTTGGTGGGGTTCATGGCCACCTGGTTCTTGGCTGCATCGCCGATGAGGCGCTC--- 1229127 Query 8023 ATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 | || || || || ||||| ||||| || || || || |||||||| || || || Sbjct 1229128 GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTACGGTTGCCCTGGTCGTTGGCGATGAT 1229187 Query 8083 TTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || || | | | ||| |||| || |||||||| || || || || | || || || Sbjct 1229188 CTCCACTTTGCCATGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCC 1229247 Query 8143 GATTGC 8148 || || Sbjct 1229248 AATAGC 1229253 >seq4581 Length=104725 Score = 230 bits (254), Expect = 3e-55 Identities = 579/874 (66%), Gaps = 16/874 (2%) Strand=Plus/Minus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || || ||||| || ||||| || | |||||||| | | |||||| || || ||| Sbjct 1088 GTCTCCAGTCCCAGCGACAGGGGAGCCACGTCCAGCAACAGCAGGTCCTGCACG--TTC- 1032 Query 7004 TTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 ||| ||| | ||| | | |||||| || || |||| ||||||||| || |||||||| Sbjct 1031 -TCCGACTTGTCCCCCATCAGGATGGCCGCCTGCACCGCCGCCCCGTACGCCACCGCCTC 973 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 |||||||| || | || || || || ||||| || | ||| | || | || Sbjct 972 GTCGGGGTTGATGCTCTTGTTGAGGTCGCGCCCGTTGAAGAAGTCCTGCAGCAGCTTCTG 913 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || || || || || |||| || | || | | | || || || Sbjct 912 CACCTTGGGGATGCGGGTGGAGCCCCCCACCAGGACCAGGTCGTGGATCTGCGCCTTGTC 853 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || | || || || || |||| | ||||||| ||| Sbjct 852 CAGCTTGGCGTCGCGCAGCGCCTTCTCCACGGGCTCCAGGGTGCTCCGGAACAGGTCGGA 793 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||||| ||||| || || || | ||| ||||| || ||||| || | ||| ||| | | Sbjct 792 GCACAGCTCCTCGAACCGCGCCCTGGTGATGGACGTGTAGAAGTCGATGCCCTCGAACAG 733 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || || || || | | | | || | | || || || |||| ||| || ||||| || Sbjct 732 GGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGACGACAAGGTTCTCTTGGCCCGCTCGCA 673 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || || || | || | | ||| ||| ||| | || || ||||| || || | Sbjct 672 TGCGGTGCGCAGCCGCCTCACGGCCCGCTTGTTCTGGCTGATGTCCTTCTTGTGCTTCCT 613 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| || |||||| | || || ||||| || || || |||| ||| Sbjct 612 CTTGAACTCCTCCACGAAGTGGTTCACCAGCCTGTTGTCGAAGTCCTCCCCGCCCAGGTG 553 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || ||||| || || || || || || ||||| || | || || | | | || || Sbjct 552 CGTGTCCCCGGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCGATCGTCAGGATGGACAC 493 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTGT--- 7595 || ||||| || || ||||| ||||| ||||| ||||| || ||| | ||| Sbjct 492 GTCGAACGTGCCCCCTCCCAGATCAAAGATGAGCACGTTG----CGCTCGCCCTTGCCCG 437 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 || | || || ||||| ||||| || || ||||| || || || || || | || || Sbjct 436 TCCTGTCCAGGCCGTAGGCGATTGCGGCGGCCGTGGGCTCGTTGATGATCCTCAGCACGT 377 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 |||| || || || |||| || || || || || || ||||| ||||| ||||||| Sbjct 376 TCAGCCCCGCGATCACCCCCGCGTCCTTGGTGGCCTGCCGCTGCGAGTCGTTGAAGTAGG 317 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 |||| || || | ||||||| || || | ||| || |||| || ||||| || | Sbjct 316 CCGGCACGGTGATCACCGCGTTGGTCACCGGGTGACCCAGGTACGCCTCGGCGATCTCCT 257 Query 7776 TCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||| ||||| || |||||||| || ||||| || Sbjct 256 TCATCTTGGTCAGCACCATCGACGAGATCTCCTC 223 Score = 131 bits (144), Expect = 2e-25 Identities = 359/549 (65%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || || ||||| ||||| || || ||||| || ||||| || || | || |||||| Sbjct 11558 TCCAGGCCGTAGGCGATGGCGGCGGCCGTGGGCTCATTGATGATCCTCAGCACGTTCAGC 11499 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || |||| || || || || || || ||||| ||||| ||||||||||| Sbjct 11498 CCCGCGATCACCCCCGCGTCCTTGGTGGCCTGCCGCTGCGAGTCGTTGAAGTAGGCCGGC 11439 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || | ||||||| || || | ||| || |||| || ||||| || ||||| Sbjct 11438 ACGGTGATCACCGCGTTGGTCACCGGGTGACCCAGGTACGCCTCGGCGATCTCCTTCATC 11379 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAA 7840 ||||| || |||||||| || ||||| || | ||| || || || || || | Sbjct 11378 TTGGTCAGCACCATCGACGAGATCTCCTCCGGGTAGAACGCCTTGGTCTCCCCTTTGTAG 11319 Query 7841 TCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTC 7900 || | | | | || || | | | || ||| || | | ||| | ||| Sbjct 11318 CTGACCTGCACCTTAGGCTTGT---CTCCGTCGTTGATGACGCGGAAAGGCCAGTGCTTC 11262 Query 7901 ATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAA 7960 || || || ||| |||| ||||| | ||||| || ||||| || || || Sbjct 11261 ATGTCCGACTGCACCACCGGGTCTCCGAACTTGCGGCCGATCAGCCGCTTCGCGTCGAAC 11202 Query 7961 ACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020 || ||||| | ||||||| || |||||||| ||||| || ||||| || || || Sbjct 11201 ACCGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGCCGCATCTCCGATGAGCCGCTCG 11142 Query 8021 TTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 || || || || || ||||| ||||| || || || || |||||||| || || Sbjct 11141 GTA---TCGGTGAAGGCTACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATG 11085 Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140 || || || | ||| || | || || ||||| || || || || || | || || Sbjct 11084 ATCTCCACCTTGCCGTGCTGGAACACCCCTACGCAGGAGTAGGTGGTGCCCAGGTCGATG 11025 Query 8141 CCGATTGCT 8149 ||||| ||| Sbjct 11024 CCGATAGCT 11016 >seq906 Length=1012845 Score = 215 bits (238), Expect = 7e-51 Identities = 371/539 (69%), Gaps = 0/539 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || ||||| || |||||||| ||||| || | |||||||||||||| ||||| || Sbjct 418077 GCACCATATGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTCCCGTTGAAG 418018 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | | || ||||| || ||||| || || || ||||| ||||| || || Sbjct 418017 AAGTCCTGGAGAAGTTTCTGAATCTTGGGGATACGGGTTGAGCCACCAACCAAGACAATA 417958 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | || | || | ||| | ||| || ||||| |||| Sbjct 417957 TCATGAATCTGAGACTTGTCCAGTTTGGCATCCCTAAGGGCTTTCTCCACAGGGTCCAGG 417898 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||||||| | || ||| ||||| || ||||||||||| || |||||| Sbjct 417897 GTGCCACGGAACAAGTCAGCATTCAATTCTTCAAATCGGGCACGGGTAATAGAGGTATAG 417838 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || || | |||||||| ||||| | | || | | ||||| | Sbjct 417837 AAGTCGATTCCTTCATAGAGGGAATCAATCTCAATACTGGCCTGGGTGCTGGAAGAGAGA 417778 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || |||||||| || || || | ||||| | || | | ||| | Sbjct 417777 GTGCGCTTAGCACGCTCACAAGCAGTACGGAGGCGACGGACAGCCCTCTTGTTTTCACTG 417718 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 ||||| ||||| |||||||| || |||||| || || || || | | || Sbjct 417717 ATATCCTTCTTGTGTTTACGCTTGAACTCTGCAATAAAATGGTTAACCATGCGGTTGTCA 417658 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| ||||| || || || | |||||| |||||||| || | Sbjct 417657 AAGTCTTCTCCACCCAAGTGGGTATCTCCAGCTGTAGATTTGACCTCAAAGATTCCATCC 417598 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||||| | | | || |||||||| || |||||||| | ||||| || || || || Sbjct 417597 TCAATAGTGAGGATTGACACATCAAAAGTGCCACCACCTAAATCAAAGATCAGCACATT 417539 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 || || || ||||| || || ||||| ||||| || || ||||| ||| || |||||| Sbjct 417427 CCATAGGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCGAAGTACGTTGAGACCAGCA 417368 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 |||||| | |||||||| || || || || || || || ||||| ||||| || || || Sbjct 417367 ATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTAAAATAGGCAGGTACTGTG 417308 Query 7727 ACGACCGCGT 7736 ||||| |||| Sbjct 417307 ACGACAGCGT 417298 >seq1033 Length=2538769 Score = 212 bits (234), Expect = 8e-50 Identities = 972/1524 (64%), Gaps = 52/1524 (3%) Strand=Plus/Minus Query 6572 TCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAAT 6631 |||||| |||| |||||||| || ||||| ||||||| ||||||||| || || || Sbjct 1307711 TCTTCAGCTTTGTACTTTTCTGCTTCTTGAACCATCTGTTCAATGTCATCCTTGCTCAAA 1307652 Query 6632 CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 | ||||| ||||| || || |||||||| | || || | | |||||| |||| Sbjct 1307651 CAGCCCTTGTCATTAGTGATGGTAATCTTGTTCTCTTATCCTGTGCTCTTATCCATAGCA 1307592 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 ||||| | ||| ||||| ||||||| ||| || | || | || || | || Sbjct 1307591 AAGACATTGAGAATGCCATTGGCATCAATATCAAAAGTGACTTCGATCTGAGAAACACTA 1307532 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 | || || | | || || || | ||||| | ||||| || |||||||| | | | Sbjct 1307531 CAGGG-GCAGGAGATATGCCTGTGAGTTCAAACTTGCCAAGCAAGTTGTTATCCTTGGTC 1307473 Query 6812 TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTT 6871 | | | ||||||||||| || | ||| || |||| || || || | | | | Sbjct 1307472 ATGGTTCACTCACCTTCATAAACCTGAATGAGAACACCAGGCTGGTTGTCA-GAGTAGGT 1307414 Query 6872 GA-GAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCAT 6930 || ||| | || | ||| | ||||| || ||||| | | || | || Sbjct 1307413 GATGAAAGTCTGCATCTGCTTGGTAGGAATGGTGGTATTGTGCTTGAGGACAC---TTAT 1307357 Query 6931 AATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC 6990 | ||||| |||||| | |||||| || || || || || ||| | || | || ||| Sbjct 1307356 GACTCCACCAGCAGTTTCAATTCCAAGGGAAAGGGGAGTGACATCCGACAGCAGCAAGTC 1307297 Query 6991 TTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGC 7050 |||| || | | | || || | || ||||| | ||||| | || || ||||| Sbjct 1307296 TTGAGCATTTCAGATTTGTTT-CCAGACAAAATGGCTACCTGGACAGCTGCACCATATGC 1307238 Query 7051 GACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC--GAT 7108 | |||||| | ||||| || | |||||||||||||| | |||| | ||| || Sbjct 1307237 AAGAGCCTCACCAGGGTTGATGCTCTTATTCAGTTCTTTCCTACTAAAGAAGTCCTGGAG 1307178 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 || |||| | |||| || ||||| | || || ||||| |||||||| || || | | Sbjct 1307177 AA-ATTTCT-GAATCTTGGGGATGTGAGTTGAGCCACCCACCAAAACAATATCGTGGATC 1307120 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGG 7228 | || || || | ||| | || |||| | ||| || | || ||| |||| Sbjct 1307119 TGAGACTTGTCCAGCTTGGCATCCTGAAGGGCTTTCTCCATAGTGTCCCGGGTGCCACGG 1307060 Query 7229 AACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACG 7288 |||||||| | || ||| ||||| | |||| | | Sbjct 1307059 AACAAGTCAGCATTCAATTCTTCAAATC---------------------AGAAGTTGATT 1307021 Query 7289 CCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTT 7348 || || || | |||||||| ||||| | | || | | ||||| | || ||||| Sbjct 1307020 CCTTCATAGAGGGAATCAATCTCAATACTGGCCTGGGTTCTGGAAGAGAGAGTGCGCTTA 1306961 Query 7349 GCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTC 7408 || ||||| | || || || | | || | || | | ||| | ||||| ||| Sbjct 1306960 GCAAGCTCAGAAGCAGTACGGAGGCAACAGACAGCCCTCTTGTTCTCACTGATATCCTTC 1306901 Query 7409 TTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTT 7466 || ||||| | || |||||| || ||| || | || | | | | || || |||| Sbjct 1306900 TTGTGTTTGCTCTTGAACTCTGCAAGGAAATGGTTGACCCTGCCATTG--TCAAAGTCTT 1306843 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 | ||| ||||| ||| || || | | ||| || |||||||| || | ||||| Sbjct 1306842 CTCCAGACAAGT----ATCTCCAGCTATAGATTTAACCTCAAAGATTCCATCCTCAATAG 1306787 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | | | || ||| |||| | |||||||| | ||||| || || || || | || Sbjct 1306786 TGAGGATTGACACACCAAAA-TGCCACCACCTAAATCAAAGATCAGCACATTTCTCTCTG 1306728 Query 7587 CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646 | | | || || | || || || ||||| || || ||||||||| | || | | Sbjct 1306727 CTCCAACCCTTTTGTCCAAGCCATAGGCAATAGCAGCAGCAGTTGGTTCACTGATGGTTC 1306668 Query 7647 GAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 ||| ||| | || ||||||| |||| |||||||| || || || || || || || Sbjct 1306667 TAAGTACA-TGGAGACCAGCAACAGTTCTAGCATCTTTGGTAGCCTGACGCTGAGAGTCA 1306609 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 ||||||||||| || | || || || |||| ||||| |||| || || | ||| Sbjct 1306608 TTAAAGTAGGCAGGCGCTGTGACAACAGCGTTGGTGACAGTCTTCCCAAGGCAGACTTCT 1306549 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAAACTGTTT 7824 || || |||||| | || || || ||||| |||| ||||| || | ||||| ||| Sbjct 1306548 GCAATTTCTTTCCTCTTTGTCAGGACCATGGATGGCATCTCCTCTGGATAAAAACTCTTT 1306489 Query 7825 CGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTT 7884 || || || || | || |||| || | | ||| | | ||| || | ||| | Sbjct 1306488 -GTCTCTCCCTTGTATTCTACTTAAACCTTAGGTCTGCCAGCATCATTTG---CCACCAT 1306433 Query 7885 ATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAG 7944 | | ||||| ||||||| | ||||| || ||| ||| ||| ||||| Sbjct 1306432 GAAGGGCCAATGTTTCATAACAGACTGGACAACAGCATCATCAAATCTTCATCCAATAAG 1306373 Query 7945 ACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTC 8004 | || ||||||||||| ||||| |||| ||||| || ||||||||| || || || Sbjct 1306372 TTGTTTGGCATCAAAAACCGTGTTGGTGGGATTCATTGCGACTTGGTTCTTTGCAGCATC 1306313 Query 8005 CCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCC 8064 || || | ||| | | | ||||| | ||| || |||||| |||| | |||| Sbjct 1306312 ACCAATCAATCGT---CTGGTGTTAGTAAAGGTGACATAGCTTGGGGTGGTTC-AGTCCC 1306257 Query 8065 TTGGTCGTTCGCAATAATTTCTAC 8088 || || || ||||| ||||| || Sbjct 1306256 CTGATCATTGGCAATTATTTCCAC 1306233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634805770121280