Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq3690 105 9e-18 seq1934 105 9e-18 seq1227 105 9e-18 seq1173 105 9e-18 seq2243 104 3e-17 seq804 104 3e-17 seq3199 98.7 1e-15 seq664 95.1 2e-14 seq201 89.7 7e-13 seq182 87.8 2e-12 seq1473 84.2 3e-11 seq756 82.4 1e-10 >seq3690 Length=284185 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 134574 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 134633 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 134634 CCCCGACGGGGAG 134646 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 188897 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 188838 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 188837 CCCCGACGGGGAG 188825 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 134575 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 134634 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 134635 CCCGACGGGGAGG 134647 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 188896 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 188837 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 188836 CCCGACGGGGAG 188825 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 134646 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 134587 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 134586 TACTAACGAGGA 134575 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 188825 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 188884 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 188885 TACTAACGAGGA 188896 >seq1934 Length=948852 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 873575 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 873516 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 873515 CCCCGACGGGGAG 873503 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 948767 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 948708 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 948707 CCCCGACGGGGAGG 948694 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 948766 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 948707 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 948706 CCCGACGGGGAG 948695 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 873574 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 873515 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 873514 CCCGACGGGGAG 873503 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 873503 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 873562 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 873563 TACTAACGAGGA 873574 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 948695 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 948754 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 948755 TACTAACGAGGA 948766 >seq1227 Length=586938 Score = 105 bits (116), Expect = 9e-18 Identities = 69/75 (92%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 26902 AGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 26843 Query 11787 TCCCCGACGAGGAGG 11801 ||||||||| ||||| Sbjct 26842 TCCCCGACGGGGAGG 26828 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 26903 TAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 26844 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 26843 TTCCCCGACGGGGAG 26829 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 29877 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 29818 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 29817 CCCGACGGGGAG 29806 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 29877 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 29818 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 29817 CCCGACGGGGAGG 29805 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 29806 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29865 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 29866 TACTAACGAGGAT 29878 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 26829 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26888 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 26889 TACTAACGAGGA 26900 >seq1173 Length=1175989 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 503636 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 503695 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 503696 CCCCGACGGGGAG 503708 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 503637 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 503696 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 503697 CCCGACGGGGAGG 503709 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 503708 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 503649 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 503648 TACTAACGAGGA 503637 >seq2243 Length=1906131 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 221796 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 221737 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 221736 CCCGACGGGGAG 221725 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 221796 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 221737 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 221736 CCCGACGGGGAGG 221724 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 221725 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 221784 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 221785 TACTAACGAGGA 221796 >seq804 Length=511346 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 303992 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 303933 Query 8718 CCCGACGAGGAGCAG 8732 ||||||| |||| || Sbjct 303932 CCCGACGGGGAGGAG 303918 Score = 102 bits (112), Expect = 1e-16 Identities = 69/76 (91%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 303995 CACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 303936 Query 11786 TTCCCCGACGAGGAGG 11801 |||||||||| ||||| Sbjct 303935 TTCCCCGACGGGGAGG 303920 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 303921 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 303980 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 303981 TACTAACGAGGA 303992 >seq3199 Length=456099 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||| ||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 453328 TCCTCGTTACTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 453269 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 453268 CCCGACGGGGAG 453257 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||| ||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 453328 TCCTCGTTACTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 453269 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 453268 CCCGACGGGGAGG 453256 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 453257 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 453316 Query 139413 TACTAACGAGGAT 139425 || |||||||||| Sbjct 453317 TAGTAACGAGGAT 453329 >seq664 Length=470765 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||| | ||||||| ||||| |||| ||||| | |||||||||| ||||||||| Sbjct 35357 GTCCTCGTTAATGTAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGAGGTTCGATT 35416 Query 11788 CCCCGACGAGGAGG 11801 |||||||||||||| Sbjct 35417 CCCCGACGAGGAGG 35430 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||| | ||||||| ||||| |||| ||||| | |||||||||| |||||||||| Sbjct 35358 TCCTCGTTAATGTAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGAGGTTCGATTC 35417 Query 8718 CCCGACGAGGAG 8729 |||||||||||| Sbjct 35418 CCCGACGAGGAG 35429 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| ||||||| |||||||||| | |||| |||||||| | ||||||| Sbjct 35429 CTCCTCGTCGGGGAATCGAACCTCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 35370 Query 139413 TACTAACGAGGA 139424 | ||||||||| Sbjct 35369 CATTAACGAGGA 35358 >seq201 Length=1043613 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| | ||| |||| ||||| | ||||||||| || ||||||| Sbjct 146568 GTCCTCGTTAGTATAGTGGTGAATATCCCCGCCTGTCACGCGGGAGACCAGGATTCGATT 146627 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 146628 CCCCGACGGGGAGG 146641 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| | ||| |||| ||||| | ||||||||| || |||||||| Sbjct 146569 TCCTCGTTAGTATAGTGGTGAATATCCCCGCCTGTCACGCGGGAGACCAGGATTCGATTC 146628 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 146629 CCCGACGGGGAG 146640 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||| || ||||||||| | |||| |||||||||| ||||||| Sbjct 146640 CTCCCCGTCGGGGAATCGAATCCTGGTCTCCCGCGTGACAGGCGGGGATATTCACCACTA 146581 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 146580 TACTAACGAGGA 146569 >seq182 Length=4423490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 11720 TGTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGG 11778 ||||| | ||| |||||||||||||||| | ||| |||| ||||| | | |||||||| Sbjct 1259557 TGTAAAGCCGTCTTCGTTAGTATAGTGGTGAATATCCCCGCCTGTCACGCCAGAGACCGG 1259616 Query 11779 GGTTCGATTCCCCGACGAGGAGG 11801 ||||||||||||||||| ||||| Sbjct 1259617 GGTTCGATTCCCCGACGGGGAGG 1259639 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || |||||||||||||||| | ||| |||| ||||| | | |||||||||||||||||| Sbjct 1259567 TCTTCGTTAGTATAGTGGTGAATATCCCCGCCTGTCACGCCAGAGACCGGGGTTCGATTC 1259626 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1259627 CCCGACGGGGAG 1259638 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| ||||||||||||||| | | |||| |||||||||| ||||||| Sbjct 1259638 CTCCCCGTCGGGGAATCGAACCCCGGTCTCTGGCGTGACAGGCGGGGATATTCACCACTA 1259579 Query 139413 TACTAACGAGGA 139424 ||||||||| || Sbjct 1259578 TACTAACGAAGA 1259567 >seq1473 Length=691215 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 139360 TCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATACTAAC 139419 ||||||| || |||||| ||||||||||| |||| |||||||| | ||||||||||||| Sbjct 34202 TCGGGGACTCAAACCCCAGTCTCCCGTGCAACAAGCGGGGATACTCACCACTATACTAAT 34143 Query 139420 GAGGAT 139425 |||||| Sbjct 34142 GAGGAT 34137 >seq756 Length=716055 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||| | ||||| |||| ||||| ||| ||||||| |||||| ||| Sbjct 687130 GTCCTCGTTAGTATAGTGCTGAGTATCCCCGCCTGTCACACAGGAGACCAGGGTTCAATT 687189 Query 11788 CCCCGACGAGGAGGGAG 11804 ||| || | ||||| || Sbjct 687190 CCCTGATGGGGAGGCAG 687206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652508650212480