Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3059 145 2e-29 seq87 145 2e-29 seq1484 138 3e-27 seq1227 132 1e-25 seq2985 100 7e-16 seq565 96.9 8e-15 seq208 91.5 4e-13 seq1240 89.7 1e-12 seq1626 84.2 5e-11 >seq3059 Length=469066 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||| || ||||| |||| |||||||| | | ||| | |||||| Sbjct 20110 AGGACCAGGTGCAGAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 20169 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || ||||| |||||||| || Sbjct 20170 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 20229 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 20230 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 20289 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | ||| | |||||||| Sbjct 20290 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 20324 >seq87 Length=1745107 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| | |||||| Sbjct 605884 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 605943 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || |||||||| ||||| || ||||| || Sbjct 605944 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCC 606003 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 606004 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 606063 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| ||||| | ||| | |||||||| Sbjct 606064 TTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 606098 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| | |||||| Sbjct 605656 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 605715 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || ||||| |||||||| || Sbjct 605716 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 605775 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 605776 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 605835 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 605836 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 605867 >seq1484 Length=2418587 Score = 138 bits (152), Expect = 3e-27 Identities = 167/226 (74%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| || || || ||||| || || ||||| | ||||| || | |||||| Sbjct 499489 ACGAAGTCTCAACACTAGATGAAGAGTCGACTCCTTTTGCATGTTGTAGTCAGACAAAGT 499548 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| ||||| || ||||| || Sbjct 499549 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 499608 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||| ||| ||| | || || |||| || || || || Sbjct 499609 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCCGAGGGCTCAACCTCGAA 499668 Query 225672 -CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||| || || || ||||| | ||||| || Sbjct 499669 GAGTGATGGTCTTCCCCATCCGGGTCTTCATGAAAATCTGCATCTT 499714 >seq1227 Length=586938 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| |||||||| ||||| |||| ||||| || | || || | ||||| Sbjct 12885 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 12944 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| ||||| || ||||| || | || ||||| || || || || || ||||| Sbjct 12945 TTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTC 13004 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| || ||||||||||| || ||||| || | ||||| || Sbjct 13005 TTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 13064 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||| || || | ||| | ||||| Sbjct 13065 CTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 13097 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 13114 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 13173 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 13174 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 13233 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 13234 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 13293 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 13294 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 13325 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 13342 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 13401 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 13402 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 13461 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 13462 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 13521 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 13522 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 13553 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 13570 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 13629 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 13630 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 13689 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 13690 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 13749 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 13750 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 13781 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 13798 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 13857 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 13858 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 13917 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 13918 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 13977 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 13978 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 14009 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 14026 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 14085 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 14086 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 14145 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 14146 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14205 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 14206 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 14237 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 14254 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 14313 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 14314 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 14373 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 14374 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14433 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 14434 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 14465 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 14482 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 14541 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 14542 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 14601 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 14602 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14661 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 14662 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 14693 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 14710 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 14769 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 14770 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 14829 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 14830 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14889 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 14890 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 14921 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 14938 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 14997 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 14998 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 15057 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 15058 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 15117 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 15118 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 15149 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | |||||| Sbjct 15166 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 15225 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| || | || ||||| || || || || || |||||| Sbjct 15226 TCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 15285 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 15286 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 15345 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 15346 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 15377 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||||| || | || || | ||||||| Sbjct 15394 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 15453 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| | | || ||||| || || || ||||| || ||| Sbjct 15454 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCT 15513 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 15514 TGTATCTTCCCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTT 15573 Query 225682 TTGCCCGT 225689 || || || Sbjct 15574 TTACCAGT 15581 >seq2985 Length=258859 Score = 100 bits (110), Expect = 7e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| || || ||||| || | || ||||| || ||||| || ||| Sbjct 227519 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCC 227460 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || |||||||| |||||| ||||||||||| || ||||| || | ||| Sbjct 227459 TTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 227400 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| |||| || || | ||| | ||||| Sbjct 227399 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 227362 >seq565 Length=714221 Score = 96.9 bits (106), Expect = 8e-15 Identities = 97/126 (77%), Gaps = 4/126 (3%) Strand=Plus/Minus Query 4453 TTAATCAAAAATATTGTGAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATA 4512 ||||||| ||| || |||| || || ||||| || || || |||||||| || || Sbjct 436826 TTAATCATAAAAAT----AATACCTGTCCGTCAGTGATGGAAATGACATTTGTTGGAATG 436771 Query 4513 TAAGCAGAAACATCACCTGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCA 4572 |||||||| |||||||| ||||||||||||| || |||| || || | || |||||| Sbjct 436770 TAAGCAGACACATCACCAGCTTGTGTTTCGATGACTGGTAGAGCAGTCAAGGAGCCACCA 436711 Query 4573 CCAAAA 4578 |||||| Sbjct 436710 CCAAAA 436705 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || || | || ||| || |||||||||||||| ||||||| Sbjct 436383 CACTTCAGTACCTGGCTCCTTATTCTGGATGTTCAATGGGAGAATATTTTAGGGATAATG 436442 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122 | ||||| ||||| ||||| || ||||| ||| ||||| |||| Sbjct 436443 GCAAACACGCTTTGATCATTTATGATGACTTATCCAAACAGGTCAA 436488 >seq208 Length=1501725 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| ||||| || || ||||||||||| |||||||| |||||||| || ||||| | Sbjct 1450012 ATACTTCGGGATGTCCGAAGAATCAGAATAAGTGTTGATATAGGATAGGGTCCCCTCCTC 1449953 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||| || || || | ||||| | ||||| ||| ||||| Sbjct 1449952 CTGCTGGGTCGAAGAAAGTTGTATTTAGATTTCAATCTGTTAA 1449910 >seq1240 Length=1952959 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || || || ||||| || || || |||||||| || || |||||||| |||| ||| Sbjct 394504 GAAGATCTGTCCGTCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGACACATTACC 394563 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||||||||||| || |||| || || | || |||||||||||| Sbjct 394564 AGCTTGTGTTTCGATGACTGGTAGAGCAGTCAAGGAGCCACCACCAAAA 394612 >seq1626 Length=1119423 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 370679 TGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGATGGATCA 370738 || ||||| ||||||||||| ||||| || |||||||| || ||||| |||| || ||| Sbjct 871447 TGTCCAAAGAATCAGAATAAGTGTTGGTATAGGATAGGGTCCCCTCCTCCTGCCGGGTCA 871388 Query 370739 AAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769 || ||| | ||||| | ||||| ||| |||| Sbjct 871387 AAGAAGGTTGTATTTAGATTTCGATCTGTTA 871357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191901814827248