Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20mutus_20[refseq_20GCF_5F000298355.1_202013-01-09] 41,192 sequences; 2,645,161,911 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3059 125 7e-24 seq87 123 2e-23 seq4133 120 3e-22 seq1227 120 3e-22 seq2985 95.1 1e-14 >seq3059 Length=469066 Score = 125 bits (138), Expect = 7e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| ||||| || ||| ||||| ||||| || || Sbjct 20091 ACAGCCACCCCTCAGACGAAGGACCAGGTGCAGAGTCGACTCTTTCTGGATGTTGTAATC 20150 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || || |||||||||||||| || || || | ||| ||||| | Sbjct 20151 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGG 20210 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||||| || ||||| ||| ||| || ||||| | | ||||| || | ||| Sbjct 20211 GGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTC 20270 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| || || || || || ||||| ||||| ||||| |||||||| || Sbjct 20271 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 20324 >seq87 Length=1745107 Score = 123 bits (136), Expect = 2e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||||| || ||| ||||| ||||| || || || || ||||| Sbjct 605878 AGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 605937 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||||||||| || || || | ||| ||||| | ||||| || |||| Sbjct 605938 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCC 605997 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| ||| || ||||| | | ||||| || | ||||||||||| || Sbjct 605998 TTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 606057 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| || || ||||| |||||||| || Sbjct 606058 ATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 606098 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| ||||| || ||| ||||| ||||| || || Sbjct 605637 ACAGCCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 605696 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || || |||||||||||||| || || || | ||| ||||| | Sbjct 605697 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGG 605756 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||||| || ||||| ||| ||| || ||||| | | ||||| || | ||| Sbjct 605757 GGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTC 605816 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| |||| || || || || || ||||| ||||| ||||| |||||||| Sbjct 605817 CACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 605867 >seq4133 Length=1091651 Score = 120 bits (132), Expect = 3e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| ||||| || ||| ||||| ||||| || || Sbjct 881316 ACAGCCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 881257 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || || |||||||||||||| || || || | ||| ||||| | Sbjct 881256 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGG 881197 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||||| || ||||| ||| ||| || ||||| | | ||||| || | ||| Sbjct 881196 GGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTAGGCTC 881137 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| || || || || | ||||| ||||| ||||| |||||||| || Sbjct 881136 CACCTCCAGGGTGATGGTCTTGCGGGTCAGGGTCTTCACGAAGATCTGCATTTT 881083 >seq1227 Length=586938 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 13117 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 13176 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 13177 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 13236 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 13237 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 13296 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 13297 CCGGTCAAGGTCTTCACGAAGATCTGCAT 13325 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 13345 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 13404 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 13405 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 13464 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 13465 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 13524 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 13525 CCGGTCAAGGTCTTCACGAAGATCTGCAT 13553 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 13573 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 13632 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 13633 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 13692 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 13693 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 13752 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 13753 CCGGTCAAGGTCTTCACGAAGATCTGCAT 13781 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 13801 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 13860 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 13861 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 13920 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 13921 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 13980 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 13981 CCGGTCAAGGTCTTCACGAAGATCTGCAT 14009 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 14029 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 14088 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 14089 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 14148 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 14149 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 14208 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 14209 CCGGTCAAGGTCTTCACGAAGATCTGCAT 14237 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 14257 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 14316 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 14317 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 14376 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 14377 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 14436 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 14437 CCGGTCAAGGTCTTCACGAAGATCTGCAT 14465 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 14485 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 14544 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 14545 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 14604 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 14605 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 14664 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 14665 CCGGTCAAGGTCTTCACGAAGATCTGCAT 14693 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 14713 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 14772 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 14773 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 14832 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 14833 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 14892 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 14893 CCGGTCAAGGTCTTCACGAAGATCTGCAT 14921 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 14941 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 15000 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 15001 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 15060 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 15061 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 15120 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 15121 CCGGTCAAGGTCTTCACGAAGATCTGCAT 15149 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| | || || Sbjct 15169 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 15228 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 15229 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 15288 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 15289 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 15348 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 15349 CCGGTCAAGGTCTTCACGAAGATCTGCAT 15377 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| | || || Sbjct 15397 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 15456 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || |||| | ||| ||||| | ||| | || || ||| | | || Sbjct 15457 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGC-CTTCTTTTTCTTG 15515 Query 41774 -ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| | | | ||||| || | ||||||||||| || || ||||| Sbjct 15516 TATCTTCCCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTTTT 15575 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || ||||| || || |||||||| Sbjct 15576 ACCAGTGAGGGTCTTCACAAAGATCTGCAT 15605 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||||| ||| ||| ||||| ||||| ||||| || |||||||| | || || Sbjct 12889 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 12948 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || ||||| | ||| ||||| | ||| | || ||| ||||| | Sbjct 12949 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 13008 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 13009 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 13068 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 13069 CCGGTCAAGGTCTTCACGAAGATCTGCAT 13097 >seq2985 Length=258859 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 41708 TCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTG 41767 || || |||||||||||||| || || || | ||| ||||| | ||||| || |||||| Sbjct 227516 TCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTA 227457 Query 41768 TCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATC 41827 ||| ||| || ||||| | | ||||| || | ||||||||||| || || Sbjct 227456 TCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 227397 Query 41828 GTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| ||||| ||||| |||||||| Sbjct 227396 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 227362 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||||| || ||| ||||| ||||| || || || || ||||| Sbjct 227351 AGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 227292 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||||||||| || || || | ||| ||||| | ||||| || ||| Sbjct 227291 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 227232 Query 41765 TTGTCC 41770 || ||| Sbjct 227231 TTATCC 227226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462065959670400