Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20taurus_20[refseq_20GCF_5F000003055.6_202014-11-25] 3,144 sequences; 2,670,139,648 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq9 500 3e-137 seq5 338 2e-88 seq8 334 2e-87 seq14 316 6e-82 seq26 313 7e-81 seq7 244 3e-60 seq19 223 1e-53 seq11 221 4e-53 seq13 212 2e-50 seq2 203 9e-48 seq18 197 4e-46 seq29 159 1e-34 seq17 158 4e-34 seq30 147 6e-31 seq23 123 7e-24 seq28 122 3e-23 seq24 120 9e-23 seq16 114 4e-21 seq1 114 4e-21 seq6 113 1e-20 seq22 96.9 1e-15 >seq9 Length=105708250 Score = 500 bits (554), Expect = 3e-137 Identities = 476/610 (78%), Gaps = 6/610 (1%) Strand=Plus/Plus Query 6909 ATCCGGCGCGCGAATTCACCATGATTCAGTCAGCTCCGCTGATGCTGCTGCCAGACCCTG 6968 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 98065338 ATCCGGCACGCGAATTCACCATGATTCAATCAGCTCCGCTGATGCTGCTGCCAGACCCTG 98065397 Query 6969 ACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTT 7028 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 98065398 ACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTT 98065457 Query 7029 CTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTGGGA 7088 |||| |||||||||||||| || |||||||||||| || | ||||||||||| ||||| | Sbjct 98065458 CTGGTGTATTTCCCATGACCGAGAAAGAAAAGCTGATCCCTCGCCTGAATGACCTTGGCA 98065517 Query 7089 CCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAG-GAACTAACGATGCGTATT 7147 | ||||||||||||||||||| ||||||||| |||||| ||||| |||||||||||| Sbjct 98065518 CTCAGCTTAACCGCGAGGTCAACACCAGCGGCATGATTCAGCGAACTTACGATGCGTATT 98065577 Query 7148 GCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGGTAAAAACGGCGTG 7207 ||||| || ||| ||||||||||||| || || | ||| ||||| || | | ||| | | Sbjct 98065578 GCTGAACTGGAAAAGGAGCTGGATGGTGATGCTAGTTCGATTGACAGTGAGAGCGGAGAG 98065637 Query 7208 CAGAATGCTTCCGACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGCTAACGTG 7267 |||||||| ||||||||| ||| | | | Sbjct 98065638 AAGAATGCTCCCGACAGCACCGACAACACCGACAGCACCGACAGCTGTGTATATGGCACG 98065697 Query 7268 GCAAAAGTAAAAACGGAATCGGCCACAACGGGTGACCTGGTATCAGTAGAAACGCTGGCC 7327 | |||||| | ||| ||| ||| ||| |||| ||||| |||||||||| ||||||||| Sbjct 98065698 GAAAAAGTTATAACCGAAGCGGTCACTACGGATGACCGGGTATCAGTAAAAACGCTGGTG 98065757 Query 7328 ACCCTGCATATTGACGCTCTGCATGCCACGCGTAACGAACCGGTATCCATCGTAGAGCCT 7387 ||| |||| || |||| || || |||| ||||||||| | || || || || |||||| Sbjct 98065758 ACCTTGCACATAAACGCGCTTCACGCCAAGCGTAACGAGTCTGTGTCTATTGTCGAGCCT 98065817 Query 7388 GGTGTGATTAT-CCGCGTATCTGAACAGGATGCCGACGA-CTTGATCGCAAAGGG-GCTG 7444 ||||| |||| |||||| |||| || || |||| | |||| | ||| |||| Sbjct 98065818 GGTGTCGTTATCCCGCGTGACTGACGTAGAGGCTAACGACCCTGATATCTCGGGGCGCTG 98065877 Query 7445 GCTTTCGAAGTCTGA-AGGGGGCCACATGGCTGATTTCGATAATCTCTTTGACGAGGCCA 7503 || ||| ||||| ||||||| |||||||||||||| ||||| ||||| || | | Sbjct 98065878 GC-CCGGAAATCTGACAGGGGGCTTAATGGCTGATTTCGACAATCTTTTTGATGAATCGA 98065936 Query 7504 TGTCGCGAGC 7513 || |||| || Sbjct 98065937 TGGCGCGCGC 98065946 >seq5 Length=121191424 Score = 338 bits (374), Expect = 2e-88 Identities = 353/470 (75%), Gaps = 2/470 (0%) Strand=Plus/Plus Query 7026 TTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTG 7085 |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct 64826427 TTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGATCGCTCGCCTGAATGACCTTG 64826486 Query 7086 GGACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACTAACGATGCGTA 7145 | || |||||||||||||||||||| |||| ||||| ||||| ||||| |||||||||| Sbjct 64826487 GCACTCAGCTTAACCGCGAGGTCAGCACCAGTGGCACGATTCATGAACTTACGATGCGTA 64826546 Query 7146 TTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGGTAAAAACGGCG 7205 |||||||||| ||||||||||||||||| || |||| ||| ||||||| ||||||| | Sbjct 64826547 TTGCTGAGCTGGAAGAGGAGCTGGATGGTGATGCCACTTCGATTGACGGAGAAAACGGAG 64826606 Query 7206 TGCAGAATGCTTCCGACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGCTAACG 7265 | |||||||| |||||||| ||| | | Sbjct 64826607 AGAAGAATGCTCTCGACAGCACCGACTGCACCGACAGCACCGACAGCGATGTATATGGCA 64826666 Query 7266 TGGCAAAAGTAAAAACGGAATCGGCCACAACGGGTGACCTGGTATCAGTAGAAACGCTGG 7325 || |||| |||||| || ||| |||||||| ||||||||||||| |||||||||||| Sbjct 64826667 CGGAAAAATTAAAAATCGATACGGTCACAACGGATGACCTGGTATCATTAGAAACGCTGG 64826726 Query 7326 CCACCCTGCATATTGACGCTCTGCATGCCACGCGTAACGAACCGGTATCCATCGTAGAGC 7385 ||| |||| || |||| || || |||||||||||||| | || || || || ||| Sbjct 64826727 TGACCTTGCACATAAACGCGCTTCACGCCACGCGTAACGAGTCTGTGTCTATTGTCTAGC 64826786 Query 7386 CTGGTGTGATTATCCGCGTATCTGAACAGGATGCCGACGACTTGATCGCAAAGG-GGCTG 7444 ||||||| |||||||| | |||| || || || || |||| | || |||| Sbjct 64826787 CTGGTGTCGTTATCCGCTTGACTGACGTAGACGCTAACAACCTGATATCTCGGGTCGCTG 64826846 Query 7445 GCTTTCGAAGTCTGA-AGGGGGCCACATGGCTGATTTCGATAATCTCTTT 7493 || ||| ||||| |||||||| |||||||||||| | ||||| ||| Sbjct 64826847 GCCCGGGAAATCTGACAGGGGGCCTAATGGCTGATTTCCACAATCTTTTT 64826896 Score = 105 bits (116), Expect = 2e-18 Identities = 111/142 (78%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 7271 AAAGTAAAAACGGAATCGGCCACAA-CGGGTGACCTGG-TATCAGTAGAAACGCTGGCCA 7328 |||||||| || || ||| ||||| ||| ||||| || |||||||| ||||||||| | Sbjct 103805179 AAAGTAAATACCGATGCGGTCACAAACGGATGACCCGGGTATCAGTACAAACGCTGGTGA 103805238 Query 7329 CCCTGCATATTGACGCTCTGCATGCCACGCGTAACGAACCGGTATCCATCGTAGAGCCTG 7388 || |||| || |||| || || || ||||||||||| | || || || || ||||||| Sbjct 103805239 CCTTGCACATAAACGCGCTTCACGC-ACGCGTAACGAGTCTGTGTCTATTGTCGAGCCTG 103805297 Query 7389 GTGTGATTATCCGCGTATCTGA 7410 |||| |||||||||| |||| Sbjct 103805298 GTGTCGTTATCCGCGTGACTGA 103805319 >seq8 Length=113384836 Score = 334 bits (370), Expect = 2e-87 Identities = 226/253 (89%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 6974 TTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGA 7033 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 49844102 TTAGTTTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGA 49844043 Query 7034 GTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTGGGACCCAG 7093 ||||||||||||||||| || ||||||||| |||| ||||||||||| ||||| || || Sbjct 49844042 GTATTTCCCATGACAGAGAATGAAAAGCTGATCGCTCGCCTGAATGACCTTGGCACTCAC 49843983 Query 7094 CTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACTAACGATGCGTATTGCTGAG 7153 ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| Sbjct 49843982 CTTAACCGCGAGGTCAGCACCAGCGGCACGATTCAGGAACTTACGATGCGTATTGCTGAG 49843923 Query 7154 CTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGGTAAAAACGGCGTGCAGAAT 7213 || ||||||||||||||||| || ||| ||| |||||||| ||||||| | ||||| Sbjct 49843922 CTGGAAGAGGAGCTGGATGGTGATGCCTGTTCGATTGACGGTGAAAACGGATAGAAGAAT 49843863 Query 7214 GCTTCCGACAGCA 7226 ||| ||||||||| Sbjct 49843862 GCTCCCGACAGCA 49843850 Score = 266 bits (294), Expect = 9e-67 Identities = 176/195 (90%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 6958 GCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTC 7017 ||||||||||||||||||||||||||||||||||| ||| ||||| | ||||| |||||| Sbjct 13400683 GCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGGATATCTTCCACAAGTGGACCTGTC 13400624 Query 7018 GGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAA 7077 ||||||||||||||||||||||||||||||||| |||||||| ||| |||| |||||||| Sbjct 13400623 GGGCCACCTTTCTGGAGTATTTCCCATGACAGATAAAGAAAAACTGATCGCTCGCCTGAA 13400564 Query 7078 TGAACTTGGGACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACTAAC 7137 ||| ||||| || || ||||||||||||||||| ||| |||||| ||||| ||||| || Sbjct 13400563 TGACCTTGGCACTCATCTTAACCGCGAGGTCAGCACCAACGGCACGATTCAAGAACTTAC 13400504 Query 7138 GATGCGTATTGCTGA 7152 ||||||||||||||| Sbjct 13400503 GATGCGTATTGCTGA 13400489 Score = 111 bits (122), Expect = 5e-20 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 7003 CCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCT 7062 ||| ||||||||| | ||||||||||||||| |||||||||||||| | ||||||||||| Sbjct 3456337 CCCGGTGGCCCTGCCCGGCCACCTTTCTGGAATATTTCCCATGACAAAGAAAGAAAAGCT 3456396 Query 7063 GGTCGCCCGCCTGAATGAACTTGG 7086 | |||| ||||||||||| ||||| Sbjct 3456397 GATCGCTCGCCTGAATGACCTTGG 3456420 >seq14 Length=84648390 Score = 316 bits (350), Expect = 6e-82 Identities = 219/248 (88%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6975 TCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAG 7034 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 20384428 TCTTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCCCCTTTCTGGAG 20384487 Query 7035 TATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTGGGACCCAGC 7094 ||||||||||||||||||||||||||||| |||| ||||||||||| ||||| || || | Sbjct 20384488 TATTTCCCATGACAGAAAAAGAAAAGCTGATCGCTCGCCTGAATGACCTTGGCACTCACC 20384547 Query 7095 TTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACTAACGATGCGTATTGCTGAGC 7154 ||| |||||||||||| |||||||||| ||||| ||||| || |||||||||||||| | Sbjct 20384548 TTACCCGCGAGGTCAGCACCAGCGGCACGATTCATGAACTTACCATGCGTATTGCTGATC 20384607 Query 7155 TTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGGTAAAAACGGCGTGCAGAATG 7214 | ||||||||||||||||| || |||| ||| |||||||| ||||||| | | |||| Sbjct 20384608 TGGAAGAGGAGCTGGATGGTGATGCCAGATCGATTGACGGTGAAAACGGATAGAATAATG 20384667 Query 7215 CTTCCGAC 7222 || ||||| Sbjct 20384668 CTCCCGAC 20384675 Score = 203 bits (224), Expect = 9e-48 Identities = 132/145 (91%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 6942 CTCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTC 7001 |||||| ||||||||||||| |||||||| ||||||||||||||| |||| ||||||||| Sbjct 61070880 CTCCGCAGATGCTGCTGCCAAACCCTGACTCATTCGTCTCCGTCATACTGTCATAACTTC 61070939 Query 7002 CCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGC 7061 ||||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 61070940 CCCCACTGGTCCTGTCGGGCCTTCTTTCTGGAGTATTTCCCATGACAGAGAAAGAAAAGC 61070999 Query 7062 TGGTCGCCCGCCTGAATGAACTTGG 7086 || |||| ||||||||||| ||||| Sbjct 61071000 TGATCGCTCGCCTGAATGACCTTGG 61071024 >seq26 Length=51681464 Score = 313 bits (346), Expect = 7e-81 Identities = 200/218 (92%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 6938 TCAGCTCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAA 6997 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1041743 TCAGATCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGACAAACTGGCATAA 1041802 Query 6998 CTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAA 7057 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct 1041803 CTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGATAATTTCCCTTGACAGAGAAAGAA 1041862 Query 7058 AAGCTGGTCGCCCGCCTGAATGAACTTGGGACCCAGCTTAACCGCGAGGTCAGTTCCAGC 7117 |||||| |||| ||||||||||||||||| || | ||||||| |||||| ||| ||||| Sbjct 1041863 AAGCTGATCGCTCGCCTGAATGAACTTGGCACTCTGCTTAACAGCGAGGACAGCACCAGC 1041922 Query 7118 GGCACCATTCAGGAACTAACGATGCGTATTGCTGAGCT 7155 ||||| ||||| ||||| |||||||||||||||||||| Sbjct 1041923 GGCACGATTCATGAACTTACGATGCGTATTGCTGAGCT 1041960 Score = 271 bits (300), Expect = 2e-68 Identities = 189/215 (88%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 6844 TGATGCCCAGCGCGAAGGTATCAATGCCTCGACACGCTACCCGAAAAACTGGGTGCAGTC 6903 ||||||||||| |||| || |||| ||| |||||| |||||||||||| ||| || | | Sbjct 16883928 TGATGCCCAGCTCGAATGTTTCAACGCCACGACACCCTACCCGAAAAAATGGTTGTTGCC 16883869 Query 6904 GGGGGATCCGGCGCGCGAATTCACCATGATTCAGTCAGCTCCGCTGATGCTGCTGCCAGA 6963 |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| | Sbjct 16883868 GGGGGATCCGGCGCGCGATCTCACCATGATTCATTCAGCTCCCCTGATGCTGCTGCCTCA 16883809 Query 6964 CCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCA 7023 |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| || Sbjct 16883808 CCCTGACGCATTCGTCTCCGTCCCCCTGGCCTAATTTCCCCCAGTGGCCCTGTCGGGACA 16883749 Query 7024 CCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAA 7058 |||||||||||||||||||||||| | ||||||| Sbjct 16883748 CCTTTCTGGAGTATTTCCCATGACCCAGAAAGAAA 16883714 >seq7 Length=112638659 Score = 244 bits (270), Expect = 3e-60 Identities = 153/165 (93%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 6943 TCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCC 7002 ||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 50036396 TCCCCTGAGGATGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGAATAACTTCC 50036337 Query 7003 CCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCT 7062 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 50036336 CCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACCGAAAAAAAAAAGCT 50036277 Query 7063 GGTCGCCCGCCTGAATGAACTTGGGACCCAGCTTAACCGCGAGGT 7107 | |||| ||||||||||| ||||| || || |||||||||||||| Sbjct 50036276 GATCGCTCGCCTGAATGACCTTGGCACTCAACTTAACCGCGAGGT 50036232 >seq19 Length=64057457 Score = 223 bits (246), Expect = 1e-53 Identities = 180/218 (83%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 7009 GGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGC 7068 |||||||||| |||||| ||||||||||||||||| |||||||||||| |||| Sbjct 63537358 GGCCCTGTCGTCTGTCCTTTCAGGAGTATTTCCCATGACCCCCAAAGAAAAGCTGATCGC 63537417 Query 7069 CCGCCTGAATGAACTTGGGACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCA 7128 | ||||||||| ||||| || ||||||||||| |||||||| ||| |||| | ||||| Sbjct 63537418 TCTCCTGAATGACCTTGGCACTCAGCTTAACCGGGAGGTCAGCCCCACCGGCCCGATTCA 63537477 Query 7129 GGAACTAACGATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGT 7188 ||||| || ||||||||||||||||| ||||||||||||||||| || |||| ||| | Sbjct 63537478 CGAACTTACCATGCGTATTGCTGAGCTGGAAGAGGAGCTGGATGGTGATGCCAGTTCGAT 63537537 Query 7189 TGACGGTAAAAACGGCGTGCAGAATGCTTCCGACAGCA 7226 ||||||| ||||||| | |||||||| ||||| ||| Sbjct 63537538 TGACGGTGAAAACGGAAAGAAGAATGCTCCCGACTGCA 63537575 >seq11 Length=107310763 Score = 221 bits (244), Expect = 4e-53 Identities = 155/177 (88%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 7027 TTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTGG 7086 || ||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||| Sbjct 8431588 TTTTGGAGTATTTCCCATGACAGACAAAGAAAAGCTGATCGCTCGCCTGAATGACCTTGG 8431529 Query 7087 GACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACTAACGATGCGTAT 7146 || |||||||||||| ||||||| |||||||||| |||||||| || ||||||||||| Sbjct 8431528 CACTCAGCTTAACCGCTAGGTCAGCACCAGCGGCACGATTCAGGACCTTACGATGCGTAT 8431469 Query 7147 TGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGGTAAAAACGG 7203 ||||||||| |||||||| |||||||| || |||| || |||||||| ||||||| Sbjct 8431468 TGCTGAGCTGGAAGAGGAACTGGATGGTGATGCCAGTTCAATTGACGGTGAAAACGG 8431412 Score = 111 bits (122), Expect = 5e-20 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 7008 TGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCG 7067 |||||||||||||||| ||||||||||| |||||||||||| | |||||||||||| ||| Sbjct 70678199 TGGCCCTGTCGGGCCATCTTTCTGGAGTTTTTCCCATGACACAGAAAGAAAAGCTGATCG 70678258 Query 7068 CCCGCCTGAATGAACTTGG 7086 | ||||||||||| ||||| Sbjct 70678259 CTCGCCTGAATGACCTTGG 70678277 >seq13 Length=84240350 Score = 212 bits (234), Expect = 2e-50 Identities = 166/197 (84%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 7031 GGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTGGGACC 7090 |||||||||| ||||| ||| |||||||| ||| |||| ||||||||||| ||||| || Sbjct 43247067 GGAGTATTTCACATGAAAGATAAAGAAAATCTGATCGCTCGCCTGAATGACCTTGGCACT 43247126 Query 7091 CA-GCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACTAACGATGCGTATTGC 7149 || |||||||||||||||||| ||| || ||| ||||||||||| || ||| ||||||| Sbjct 43247127 CAAGCTTAACCGCGAGGTCAGCACCAACGACACGATTCAGGAACTTACAATGTGTATTGC 43247186 Query 7150 TGAGCTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGGTAAAAACGGCGTGCA 7209 |||||| ||||||||||||||||| || || | ||| |||||||| ||||||| | | Sbjct 43247187 TGAGCTGGAAGAGGAGCTGGATGGTGATGCTAGTTCGATTGACGGTGAAAACGGATTTAA 43247246 Query 7210 GAATGCTTCCGACAGCA 7226 ||||||| ||||||||| Sbjct 43247247 GAATGCTCCCGACAGCA 43247263 Score = 199 bits (220), Expect = 1e-46 Identities = 121/128 (95%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 6948 TGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAG 7007 ||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||| Sbjct 43299748 TGATGCTGCTGCCAGACCCTGACTCATTCGTCTCCATCAAACTGGAATTACTTCCCCCAG 43299807 Query 7008 TGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCG 7067 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 43299808 TGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAGAAAGAAAAGCTGATCG 43299867 Query 7068 CCCGCCTG 7075 | |||||| Sbjct 43299868 CTCGCCTG 43299875 Score = 131 bits (144), Expect = 5e-26 Identities = 101/120 (84%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7061 CTGGTCGCCCGCCTGAATGAACTTGGGACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGC 7120 ||| |||| ||||||||||| ||||| || || ||||||||| |||||| |||||||| Sbjct 66146427 CTGATCGCTCGCCTGAATGACCTTGGCACTCATCTTAACCGCTAGGTCACCACCAGCGGC 66146486 Query 7121 ACCATTCAGGAACTAACGATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCC 7180 | ||||| ||||| || ||||||||||||||||| ||||| ||||||||||| || ||| Sbjct 66146487 TCGATTCATGAACTTACTATGCGTATTGCTGAGCTGGAAGATGAGCTGGATGGTGATGCC 66146546 >seq2 Length=137060424 Score = 203 bits (224), Expect = 9e-48 Identities = 129/140 (92%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 6963 ACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCC 7022 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 67124905 ACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCTGAGTGGCCCTGTCGGGCC 67124846 Query 7023 ACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAAC 7082 |||||||||||| ||||||||||||| | |||||| ||||| |||| ||||||||||| | Sbjct 67124845 ACCTTTCTGGAGCATTTCCCATGACAAATAAAGAACAGCTGATCGCTCGCCTGAATGACC 67124786 Query 7083 TTGGGACCCAGCTTAACCGC 7102 |||| || |||||||||||| Sbjct 67124785 TTGGCACTCAGCTTAACCGC 67124766 Score = 201 bits (222), Expect = 3e-47 Identities = 163/195 (84%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 7000 TCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAA 7059 ||||||| |||||| ||||||| | ||||||||||||||||||| | |||||||| Sbjct 65348488 TCCCCCAAATGCCCTGGGTTGCCACCTCTTTGGAGTATTTCCCATGACACATAAAGAAAA 65348547 Query 7060 GCTGGTCGCCCGCCTGAATGAACTTGGGACCCAGCTTAACCGCGAGGTCAGTTCCAGCGG 7119 |||| |||| |||||||||| || | || |||||||||||||||||||| ||||||| Sbjct 65348548 GCTGATCGCTCGCCTGAATG-ACCTCGGCTTCAGCTTAACCGCGAGGTCAGCACCAGCGG 65348606 Query 7120 CACCATTCAGGAACTAACGATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGC 7179 ||| ||||| ||||| |||||| |||||||||||| ||||||||||||||||| || || Sbjct 65348607 CACGATTCATGAACTTACGATG-TTATTGCTGAGCTGGAAGAGGAGCTGGATGGTGATGC 65348665 Query 7180 CATCTCGGTTGACGG 7194 || ||| ||||||| Sbjct 65348666 CAGTTCGATTGACGG 65348680 Score = 178 bits (196), Expect = 4e-40 Identities = 106/111 (95%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 6957 TGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGT 7016 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 21386041 TGTCAGACCCTGACGCATTCTTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGT 21386100 Query 7017 CGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCG 7067 ||||||||||||| |||||||||||||||||||| |||||||||||| ||| Sbjct 21386101 CGGGCCACCTTTCCGGAGTATTTCCCATGACAGACAAAGAAAAGCTGATCG 21386151 >seq18 Length=66004023 Score = 197 bits (218), Expect = 4e-46 Identities = 117/122 (96%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 6938 TCAGCTCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAA 6997 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| Sbjct 38792421 TCAGCTCCGCTGATGCTGCTGCCCGACCCTGACGCATTCATCTCCGTCAAACTGGCTTAA 38792480 Query 6998 CTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAA 7057 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 38792481 CTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCAGGAGTATTTCCCATGACAGATAAAGAA 38792540 Query 7058 AA 7059 || Sbjct 38792541 AA 38792542 >seq29 Length=51505224 Score = 159 bits (176), Expect = 1e-34 Identities = 126/151 (83%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 7075 GAATGAACTTGGGACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCACCATTCAGGAACT 7134 ||| || ||||| || |||||||||||||||||||| ||| |||||| ||||||||||| Sbjct 2969887 GAAGGACCTTGGCACGCAGCTTAACCGCGAGGTCAGCACCATCGGCACGATTCAGGAACT 2969828 Query 7135 AACGATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCATCTCGGTTGACGG 7194 |||||||||||||||||||| ||| ||||||||||||| || || | || ||| ||| Sbjct 2969827 TACGATGCGTATTGCTGAGCTGGAATAGGAGCTGGATGGTGATGCTAGTTCAATTGTCGG 2969768 Query 7195 TAAAAACGGCGTGCAGAATGCTTCCGACAGC 7225 | ||||||| | |||||||| |||||||| Sbjct 2969767 TGAAAACGGATAGAAGAATGCTCCCGACAGC 2969737 >seq17 Length=75158596 Score = 158 bits (174), Expect = 4e-34 Identities = 93/97 (96%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 6943 TCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCC 7002 |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 6825526 TCCGCTGACGCTGCTGCCAGACCCTGACACATTCGTCTCCGTCAAACTGGCCTAACTTCC 6825585 Query 7003 CCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTT 7039 |||||||||||||||||||| |||||||||||||||| Sbjct 6825586 CCCAGTGGCCCTGTCGGGCCCCCTTTCTGGAGTATTT 6825622 >seq30 Length=148823899 Score = 147 bits (162), Expect = 6e-31 Identities = 90/96 (94%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 6943 TCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCC 7002 ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| Sbjct 47695618 TCCGCTGATGCTGCTGCCAGACCCTGATTCATTCGTCTCCGACAAACTGGTCTAACTTCC 47695677 Query 7003 CCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATT 7038 |||||||||||||| ||||||||||||||||||||| Sbjct 47695678 CCCAGTGGCCCTGTTGGGCCACCTTTCTGGAGTATT 47695713 Score = 123 bits (136), Expect = 7e-24 Identities = 82/90 (91%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 6959 CCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACTTCCCCCAGTGGCCCTGTCG 7018 |||||||||||||||||| |||||||||| |||| ||| ||||||||| ||||||||| Sbjct 57793583 CCAGACCCTGACGCATTCATCTCCGTCAAT-TGGCTTAATTTCCCCCAGCGGCCCTGTCA 57793525 Query 7019 GGCCACCTTTCTGGAGTATTTCCCATGACA 7048 ||||||||||||||| |||||||||||||| Sbjct 57793524 GGCCACCTTTCTGGATTATTTCCCATGACA 57793495 Score = 118 bits (130), Expect = 3e-22 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 7113 CCAGCGGCACCATTCAGGAACTAACGATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATG 7172 |||||||||| |||| ||| | |||||||||||||||||||| |||||||| ||||||| Sbjct 136410827 CCAGCGGCACGATTCCTGAATTTACGATGCGTATTGCTGAGCTGGAAGAGGATCTGGATG 136410768 Query 7173 GAGACGCCATCTCGGTTGACGGTAAAAACGGCGTGCAGAATGCTTCCGACAGC 7225 | || | | ||| |||||||| ||||||| | | |||||||| |||||||| Sbjct 136410767 GTGATGACTGTTCGATTGACGGTGAAAACGGAGAGAAGAATGCTCCCGACAGC 136410715 Score = 87.8 bits (96), Expect = 5e-13 Identities = 76/93 (82%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 7267 GGCAAAAGTAAAAACGGAATCGGCCACAACGGGTGACCTGGTATCAGTAGAAACGCTGGC 7326 || |||||||||||| ||| ||| | |||||| ||||| |||||||||||||||||||| Sbjct 46179172 GGAAAAAGTAAAAACCGAAGCGGTCGCAACGGATGACCGGGTATCAGTAGAAACGCTGGT 46179113 Query 7327 CACCCTGCATAT-TGACGCTCTGCATGCCACGC 7358 ||| |||| || |||| || || ||||||| Sbjct 46179112 GACCTTGCACATAAAACGCGCTTCACGCCACGC 46179080 >seq23 Length=52530062 Score = 123 bits (136), Expect = 7e-24 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 7027 TTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCTGGTCGCCCGCCTGAATGAACTTGG 7086 ||||||| ||||||||||||||||||||||||||||| ||| | ||||||||| ||||| Sbjct 4287371 TTCTGGATTATTTCCCATGACAGAAAAAGAAAAGCTGACCGCTCACCTGAATGACCTTGG 4287430 Query 7087 GACCCAGCTTAACCGCGAGGTCAGTTCCAGCGGCAC 7122 || ||||||||||||||||||| |||||||||| Sbjct 4287431 CACTCAGCTTAACCGCGAGGTCATCACCAGCGGCAC 4287466 >seq28 Length=46312546 Score = 122 bits (134), Expect = 3e-23 Identities = 85/97 (88%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 7003 CCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAAAAAGAAAAGCT 7062 |||| || |||||||||||||||||| |||||||||||||||||| | ||||||||||| Sbjct 20597996 CCCACTGATCCTGTCGGGCCACCTTTCCGGAGTATTTCCCATGACAAATAAAGAAAAGCT 20598055 Query 7063 GGTCGCCCGCCTGAATGAACTTGGGACCCAGCTTAAC 7099 | |||| ||||||||||| ||||| || || |||||| Sbjct 20598056 GATCGCTCGCCTGAATGACCTTGGCACTCATCTTAAC 20598092 >seq24 Length=62714930 Score = 120 bits (132), Expect = 9e-23 Identities = 163/218 (75%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 7267 GGCAAAAGTAAAAACGGAATCGGCCACAACGGGTGACCTGGTATCAGTAGAAACGCTGGC 7326 || |||||||||||| ||| ||| ||| |||| ||||| |||||||| ||||||||||| Sbjct 38729502 GGAAAAAGTAAAAACCGAAGCGGTCACCACGGATGACCGGGTATCAGGAGAAACGCTGGT 38729443 Query 7327 CACCCTGCATATTGACGCTCTGCATGCCACGCGTAACGA-ACCGGTATCCATCGTAGAGC 7385 ||| |||| || |||| || || |||||||||||||| || || || || || || | Sbjct 38729442 GACCTTGCACATAAACGCGCTTCACGCCACGCGTAACGAGTCCTGTGTCTATTGTCGA-C 38729384 Query 7386 CTGGTGTGATTAT-CCGCGTATCTGAACAGGATGCCGACGACTTGATCGCAAAGGGGCTG 7444 ||||||| |||| |||||| || || | || ||||| |||| | || |||| Sbjct 38729383 CTGGTGTCGTTATCCCGCGTGAATG-ACGTAAGGCTAACGACCTGATATCTCGGGCGCTG 38729325 Query 7445 G-CTTTCGAAGTCTGA-AGGGGGCCACAT-GGCTGATT 7479 | | ||| ||||| |||||||| || |||||||| Sbjct 38729324 GCCCCGGGAAATCTGACAGGGGGCCTAATGGGCTGATT 38729287 Score = 102 bits (112), Expect = 2e-17 Identities = 110/142 (77%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 7271 AAAGTAAAAACGGAATCGGCCACAACGGGTGACCTGG-TATCAGTAGAAACGCTGGCCAC 7329 ||| ||||||| ||| ||| |||||||| ||||| || ||||| || || |||||| || Sbjct 48798532 AAACTAAAAACCGAAGCGGTCACAACGGATGACCCGGATATCAATACAA-CGCTGGTGAC 48798590 Query 7330 CCT-GCATATTGACGCTCTGCATGCCACGCGTAACGAACCGGTATCCATCGTAGAGCCTG 7388 | | | || | |||| || || |||||||||||||| | || || || || ||||||| Sbjct 48798591 CTTTGTATTTAAACGCGCTTCACGCCACGCGTAACGAGTCTGTGTCTATTGTCGAGCCTG 48798650 Query 7389 GTGTGATTATCCGCGTATCTGA 7410 |||| |||||||||| |||| Sbjct 48798651 GTGTCGTTATCCGCGTGACTGA 48798672 >seq16 Length=81724687 Score = 114 bits (126), Expect = 4e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 6940 AGCTCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCAAACTGGCATAACT 6999 ||| |||||||||||| || | |||||||||||||||| ||||||||||||||||||||| Sbjct 56252782 AGCACCGCTGATGCTGATGGCGGACCCTGACGCATTCGCCTCCGTCAAACTGGCATAACT 56252841 Query 7000 TCCCCCAGTGGCCCTGTC 7017 ||||||||||| |||||| Sbjct 56252842 TCCCCCAGTGGACCTGTC 56252859 >seq1 Length=158337067 Score = 114 bits (126), Expect = 4e-21 Identities = 63/63 (100%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 6992 GCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAA 7051 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147424692 GCATAACTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAA 147424751 Query 7052 AAA 7054 ||| Sbjct 147424752 AAA 147424754 Score = 105 bits (116), Expect = 2e-18 Identities = 124/164 (76%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 7270 AAAAGTAAAAACGGAATCGGCCACAACGGGTGACCTGGTATCAGTAGAAACGCTGGCCAC 7329 |||||| | || ||||||| |||||||| |||| ||||||| || ||||||||| || Sbjct 27440825 AAAAGTGATTACCGAATCGGTCACAACGGATGACTGGGTATCAATAAAAACGCTGGTGAC 27440884 Query 7330 CCT-GCATATTGACGCTCTGCATGCCACGCGTAACGAACCGGTATCCATCGTAGAGCCTG 7388 | | || || || |||| | |||||||||||||| | || || || || ||||||| Sbjct 27440885 CTTTGCTCATAAACCCTCTT-ACGCCACGCGTAACGAGTCTGTGTCTATTGTCGAGCCTG 27440943 Query 7389 GTGTGATTATCCGCGT-ATCTGAACAGGATGCCGACGACTTGAT 7431 |||| |||||||||| |||||| || || ||||| |||| Sbjct 27440944 GTGTCGTTATCCGCGTGATCTGACGTTGAGGCTAACGACCTGAT 27440987 >seq6 Length=119458736 Score = 113 bits (124), Expect = 1e-20 Identities = 98/118 (83%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 7112 TCCAG--CGGCACCATTCAGGAACTAACGATGCGTATTGCTGAGCTTGAAGAGGAGCTGG 7169 ||||| |||||| |||| | |||| ||||||||||||||||| || ||||||||||||| Sbjct 41143441 TCCAGAACGGCACGATTCCG-AACTTACGATGCGTATTGCTGATCTGGAAGAGGAGCTGG 41143499 Query 7170 ATGGAGACGCCATCTCG-GTTGACGGTAAAAACGGCGTGCAGAATGCTTCCGACAGCA 7226 |||| || |||| ||| |||||||| || |||| | | |||||||| ||||||||| Sbjct 41143500 ATGGTGATGCCAGTTCGATTTGACGGTGAACACGGAGAGAAGAATGCTCCCGACAGCA 41143557 >seq22 Length=61435874 Score = 96.9 bits (106), Expect = 1e-15 Identities = 100/127 (79%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 7287 CGGCCACAACGGGTGACCTGGTATCAGTAGAAA-CGCTGGCCACCCTGCATATTGACGCT 7345 ||| |||||||| ||||| |||||| ||||||| |||||| ||| |||| ||| |||| Sbjct 56590249 CGGTCACAACGGATGACCGGGTATCCGTAGAAAACGCTGGTGACCTTGCACATTAACGCG 56590190 Query 7346 CTG-CATGCCACGCGTAACGAACCGGTATCCATCGTAGAGCCTGGTGT-GATTATCCGCG 7403 || || ||||||| |||| | | || || || || ||||||||||| | ||||||||| Sbjct 56590189 CTTTCACGCCACGCATAACCAGTCTGTGTCTATTGTCGAGCCTGGTGTCGCTTATCCGCG 56590130 Query 7404 TATCTGA 7410 | |||| Sbjct 56590129 TGACTGA 56590123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145044184573184