Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bos_20taurus_20[refseq_20GCF_5F000003055.6_202014-11-25] 3,144 sequences; 2,670,139,648 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq24 132 4e-26 >seq24 Length=62714930 Score = 132 bits (146), Expect = 4e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27214 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 27273 |||| ||| || |||||||| ||||| || | ||||||||| ||||| ||||| || || Sbjct 35942867 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACACCC 35942808 Query 27274 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAA 27333 || |||||||||||||||| |||||| | ||| || || | ||| |||| ||||| Sbjct 35942807 AGGCCCATGTCCCCCGACCGCTGGTACAACTGGCAGGACAACTCCCCATTCACCACGTAG 35942748 Query 27334 AACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| || | ||||||||| || || || |||||||| Sbjct 35942747 AACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATGAG 35942710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369493041407864