Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30]
366,983 sequences; 2,836,166,969 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq349686 154 3e-32
>seq349686
Length=1138722
Score = 154 bits (170), Expect = 3e-32
Identities = 298/438 (68%), Gaps = 5/438 (1%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| |||||||||||||| ||||| ||||||||| ||| | || || || || ||||||
Sbjct 730592 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCGTCGATATTCTGG 730533
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | ||||||| ||||| | |||||||| | ||| || |||
Sbjct 730532 CTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGAC 730473
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG-ATACCCC 102096
|| || | ||| | |||||||| ||| || |||| ||| | ||||| | | |
Sbjct 730472 GAGGGCTTGCATTGTGACTTTGCCTGCCTGATGTTCAAACA----CCTGTTGCACAAATC 730417
Query 102097 ATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
||| | | || | ||||| ||| | || || | || ||||| || || ||
Sbjct 730416 TTCAGAACAGAGAGTAAAAGAAATAATCATCAATGCAGTTAGGATAGAACAGGAGTTCCT 730357
Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216
||| | |||||||||| || | | || ||||| |||| ||||||| ||||||||
Sbjct 730356 CACGGAGGCCCTGCCTGTGAAGCTCATTGGGATGAATTGCACTTTGATGAAGCAGTACAT 730297
Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276
||| | |||||||||| ||| || | || |||| | ||| | | ||
Sbjct 730296 TGAGTGCGTGGCAGATAGACTTATGCTGGAGCTGGGCTTTAGCAAGGTTTTCAGAGTAGA 730237
Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336
|| || || || ||||| |||||||| || ||| ||||| ||||| ||||| ||
Sbjct 730236 AAATCCATTTGACTTTATGGAAAATATTTCACTGGAGGGGAAGACTAACTTCTTTGAGAA 730177
Query 102337 GAGAGTCGCCGAGTATCA 102354
|||||| | ||||||||
Sbjct 730176 GAGAGTAGGTGAGTATCA 730159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984931006028765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |