Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq350791 87.8 3e-12 >seq350791 Length=4408762 Score = 87.8 bits (96), Expect = 3e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 77353 CCGGGCACCAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGG 77412 |||||| ||| || |||| ||||||||||||||||||||| |||||||| ||||| || Sbjct 609742 CCGGGCCGCAGGAGCGTGGTGTAGCACAGGTTGTGGGCCATCATGATGGACGGGTACAGT 609801 Query 77413 CTGGCGAAGTCGAAGACCGCCACGGGGTCGTTGTAGTA 77450 || |||||| ||| || | |||| ||| |||||| Sbjct 609802 GAGGAGAAGTCCAAGGTGGCGATGGGGACGTCGTAGTA 609839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 767811993951960