Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq348299 95.1 1e-14 >seq348299 Length=121795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 ||||||| || ||||| ||||| ||||||||||| |||||||| ||||||| | |||| Sbjct 75466 AGTCTCAGACAGAGACAGGTACCCCATATATGCTCTACAAAGATTCCTGTAATCGGAAGA 75407 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| ||||| ||||| | |||||| || |||||||| | || | Sbjct 75406 GCAACCAGCAGAACTTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTAGAGT 75347 Query 112414 TTACAGACAAAGATGAG 112430 ||| |||||||||| Sbjct 75346 ATACCAGCAAAGATGAG 75330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617894876147760