Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq349176 255 5e-62 seq350253 168 5e-36 seq28684 163 2e-34 seq347166 159 3e-33 seq350407 131 1e-24 seq365069 114 1e-19 seq350747 114 1e-19 seq350242 109 4e-18 seq348243 109 4e-18 seq350494 104 2e-16 seq350590 100 2e-15 seq22905 98.7 8e-15 seq350485 96.9 3e-14 seq349101 96.9 3e-14 seq350504 93.3 3e-13 seq349183 89.7 4e-12 >seq349176 Length=335856 Score = 255 bits (282), Expect = 5e-62 Identities = 412/587 (70%), Gaps = 4/587 (1%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| |||||| ||||| | || | || || || ||| Sbjct 142740 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTTCAGCACGGAAAGGTGGAA 142799 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| ||||| | || || || || Sbjct 142800 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACC 142859 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 |||| || | |||||||| || || | |||| | | | ||||| ||||| || || Sbjct 142860 GAACGATTGATCGGTGATGCTGCCAAGAACCAAGTCGCAGTGAATCCCACCAACACGGTT 142919 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| ||||| | |||||| |||| ||| ||||| | ||| ||| | |||||| Sbjct 142920 TTTGATGCCAAACGACTTATTGGACGAAGATTTGATGATGCTGTTGTCCAGTCTGATATG 142979 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 || |||||||| ||| | || |||| | |||| | ||| | || ||| || Sbjct 142980 AAACATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTTCAAG-TAGAATA 143038 Query 550298 GAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAAAT 550356 |||| | ||| | |||| | ||||| | | ||||| ||||| | | || || Sbjct 143039 CAAGGGAGAGACAAAGAGTTTTTACCCAGAGGAGGTGTCATCCATGGTCCTGACAAAGAT 143098 Query 550357 GAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTAC 550415 ||| ||| || || | |||| |||| ||||| | || || | || |||| Sbjct 143099 GAAGGAAATCGCAGAAGCCTACCTTGG-GAAGACGGTTACCAACGCTGTTGTCACAGTAC 143157 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 | || |||||||||||||| || ||||| ||||| |||||||||||| ||||||||| | Sbjct 143158 CTGCCTATTTTAATGACTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCTGGTC 143217 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | ||||| ||||| || |||||||| || ||||||||||| |||| ||||| | || | Sbjct 143218 TCAATGTACTTCGAATCATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGCTTAGACA 143277 Query 550536 AACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || | || |||| ||||| || |||||||||| || ||| Sbjct 143278 AAAAGGTTGGAGCAGAAAGAAATGTGCTGATCTTTGATTTAGGTGGT 143324 >seq350253 Length=1460441 Score = 168 bits (186), Expect = 5e-36 Identities = 363/536 (68%), Gaps = 5/536 (1%) Strand=Plus/Plus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 || || ||||| |||||||||||||| || | | |||| || ||| ||||| | || Sbjct 969612 AAGGTGGAAATAATTGCCAATGATCAGGGGA-CTGAACCACCCCAAGCTATGTCACCTTT 969670 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 || | || || || |||||||||| ||| | | |||| | | ||||| ||| Sbjct 969671 ACTAACACCAGACGATTGATTGGTGATGCTGCATAGAACCAAGTCGCAATGAATCCCACC 969730 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || |||||||||| |||| | |||||| |||| ||| ||||| | ||| ||| Sbjct 969731 AACACGGTTTTTGATGCCAAACAACTTATTGGATGAAGATTTGATGATGCTGTTGTCCAG 969790 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | | |||||| |||||||| ||| | | |||| | |||| | |||| | || || Sbjct 969791 TCTGTTATGAAACATTGGCCCTTCATGGTGGCAAATGATGCTGGCAGACCTAAGGTTTAA 969850 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTT 550347 | || |||| | ||| | |||| | ||||| | || ||||| | ||| | Sbjct 969851 G-TAGAATACAAGGGAGAGACAAAGAGTTTTTATCCAGAGGAGATGTCATCCACGGTCCT 969909 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAA 550406 | || | |||| ||| || | | |||| |||| ||||| | || || Sbjct 969910 GACAAAGAGGAAAGAAATTGCAGAAGTCTGCCTTGGG-AAGACTGTTACCAACGCTGTTG 969968 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || |||| || || ||||||||||| || ||||| ||||| ||||||||| || || Sbjct 969969 TCACGGTACTTGCCTACTTTAATGACTCTCAGCGTCAGGCTACCAAAGATGCTAGAACTA 970028 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| || ||| ||| | || |||| |||||| ||||||||||| |||| |||| Sbjct 970029 TTGCTGGTCTCCGTGTACTTAGAATCATCAGTGAACCAACTGCTGCTGCTATTGCCTATG 970088 Query 550527 GACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | | || ||| | || ||| ||||| || |||||||||| || ||| Sbjct 970089 GCTTAGACAAAAAGGTTGGAGCAGAGAGAAATGTGCTGATCTTTGATTTAGGTGGT 970144 >seq28684 Length=2226 Score = 163 bits (180), Expect = 2e-34 Identities = 462/706 (65%), Gaps = 4/706 (1%) Strand=Plus/Plus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 ||| | ||||| || | |||||||| || | || || || |||| || || | || Sbjct 172 GCTGTCCGTCGCCTCCGTACTGCTTGTGAGCGTGCTAAGCGCACTCTCTCTTCCAGCACC 231 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || ||| |||||| | ||||| | | ||| ||||| | | |||| ||||| | Sbjct 232 CAGGCCAGTATTGAGATTGATTCCCTCTATGAAGGAATCAACTTCTATACCTCTATTACC 291 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | ||| ||||||||| | | |||| | || | || | || || || || Sbjct 292 CGTGCCCGATTTGAAGAATTGAATGCTGACTTGTTCCGTGGCACCCTGGACCCTGTGGAG 351 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 ||| | || ||| | || | || || || | | ||||| ||||| | |||||| Sbjct 352 AAAGCCCTTAGGGATGCCAAACTGGACAAGTCTCAGATTCATGATATTGTCTTGGTTGGT 411 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAA 552192 || || || | || || || |||| |||| | | || ||| || ||| || ||| Sbjct 412 GGCTCAACCCGCATCCCCAAGATTCA-GAAACTTCTCCAGGACTTCTT-CAACGGGAAAG 469 Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252 || | ||| | || | || || |||||||||||||| |||||||| || | || |||| Sbjct 470 AACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCATATGGTGCAGCTGTCCAGGCAG 529 Query 552253 CTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTC 552312 | ||| | |||||| | | |||||| | ||| | | | || | ||||| |||| Sbjct 530 CCATTTTGTCTGGAGACAAATCTGAAAATGTTCAAGACTTGCTGCTGTTGGATGTCACTC 589 Query 552313 CTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATA 552372 |||| || ||||| | ||||| | ||| || | |||||| || ||| | | |||| Sbjct 590 CTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGACTGTCCTCATCAAGCGCAATA 649 Query 552373 CTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTG 552432 | || |||||| || | | | || | || || || || || || ||| || Sbjct 650 CCACCATTCCTACCAAGCAGACGCAGACTTTCACCACTTACTCTGACAACCAGCCTGGTG 709 Query 552433 TTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTA 552492 | ||||| ||| |||||| || | | || || ||||| || | ||||| | Sbjct 710 TGCTTATTCAGGTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTGCTTGGCA 769 Query 552493 CTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTT 552552 ||| | | ||| || |||||||| || ||||| || || || |||||||| |||| Sbjct 770 AGTTTGAACTCACAGGCATACCTCCTGCCCCCCGTGGTGTTCCTCAGATTGAAGTCACTT 829 Query 552553 TCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | ||||| ||||||||||| || | ||||| ||||| ||||| Sbjct 830 TTGATATTGATGCCAATGGCATCCTCAATGTTTCTGCTGTGGATAA 875 >seq347166 Length=397626 Score = 159 bits (176), Expect = 3e-33 Identities = 341/500 (68%), Gaps = 16/500 (3%) Strand=Plus/Plus Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 || || || || || || ||||| || || || ||| | || || || ||||| | Sbjct 166873 GGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCC 166932 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAAT 550162 ||||| || ||||| | | | || |||||||| || | || ||||| || ||| Sbjct 166933 TTCACCGATACTGAGCGGCTCATCGGCGATGCAGCCAAGAACCAGGTAGCCA-TG--AAT 166989 Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT 550222 || || ||| | |||||||| |||||| | || || |||| ||||||||| | Sbjct 166990 CCCCAGAACACTGTCTTTGATGCCAAACGTCTGATAGGCAGAAAATTTAATGATCCTGTC 167049 Query 550223 GTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA- 550281 || || |||||||||| | ||||||||||||| | | |||| || || || | Sbjct 167050 GTGCAATCAGATATGAAACTTTGGCCTTTCCAAGTGATCAATGAAGGAGGCAAGCCCAAG 167109 Query 550282 -TATTGAAG--CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC 550338 || || | |||| | | ||| | ||| |||| || || |||| || || Sbjct 167110 GTAATGGTGTCCTACAAAGG--GGAAAAG--AAAGCTTTTTATCCTGAGGAAATCTCTTC 167165 Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGG 550397 |||||| ||| || ||||| | || || |||||| |||| | | | || || Sbjct 167166 TATGGTACTAACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCTACACTGTCACCA 167224 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| ||||| || || |||||||| ||||| || || || || |||| Sbjct 167225 ATGCTGTGATCACTGTGCCAGCCTACTTCAATGACTCTCAACGCCAGGCCACCAAGGATG 167284 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| || || || ||||| || | |||||||||||||| ||||||||||| Sbjct 167285 CAGGTGTTATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACTGCTGCTGCCA 167344 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| | |||||| Sbjct 167345 TTGCCTATGGCTTAGATAAA 167364 >seq350407 Length=4846239 Score = 131 bits (144), Expect = 1e-24 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | || ||||| || |||||||||||||| || ||||| ||||| Sbjct 1711858 GTTACCAACGCTGTTGTCACAGTACCTGCCTATTTTAATGACTCTCAGCGTCAGGCTACC 1711917 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || ||||| ||||| || |||||||| || |||||| Sbjct 1711918 AAAGATGCTGGAACTATTGCTGGTCTCAATGTACTTCGAATCATCAATGAGCCAACTGCT 1711977 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| ||||| Sbjct 1711978 GCTGCTATTGCCTATGG 1711994 >seq365069 Length=475 Score = 114 bits (126), Expect = 1e-19 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 231 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 174 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| ||||||||||||||||||||||| | Sbjct 173 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCTTTATCCT 114 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | |||||||| | || | Sbjct 113 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTGATGGTCT 54 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || |||||||| ||||| Sbjct 53 TCCCCGTCAGGGTCTTCACGAAAATCTGCAT 23 >seq350747 Length=3474718 Score = 114 bits (126), Expect = 1e-19 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 343435 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 343378 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 343377 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 343318 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | |||||||||| || | Sbjct 343317 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTAATGGTCT 343258 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || |||||||| ||||| Sbjct 343257 TCCCCGTCAGGGTCTTCACGAAAATCTGCAT 343227 >seq350242 Length=2039022 Score = 109 bits (120), Expect = 4e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 795410 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 795467 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || |||||||| ||||||||||| ||||||||||||||||| ||||| | Sbjct 795468 CCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 795527 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | |||||||| | || | Sbjct 795528 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTGATGGTCT 795587 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | || || || || |||||||| ||||| Sbjct 795588 TCCTCGTCAGGGTCTTCACGAAAATCTGCAT 795618 >seq348243 Length=269726 Score = 109 bits (120), Expect = 4e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 207264 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 207207 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 207206 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 207147 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | |||||||| | || | Sbjct 207146 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTGATGGTCT 207087 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || |||||||| ||||| Sbjct 207086 TCCCCGTCAGGGTCTTCACGAAAATCTGCAT 207056 >seq350494 Length=1629883 Score = 104 bits (114), Expect = 2e-16 Identities = 151/211 (72%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| ||| ||| | | ||||| Sbjct 276015 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAA----AGTACGTCCATCTT 276068 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 276069 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 276128 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | | |||||||| | || | Sbjct 276129 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCAACCTCGAGAGTGATGGTCT 276188 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || |||||||| ||||| Sbjct 276189 TCCCCGTCAGGGTCTTCACGAAAATCTGCAT 276219 >seq350590 Length=2164919 Score = 100 bits (110), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 498782 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 498725 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| |||||||||||||||| ||||| | Sbjct 498724 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTACTTATCCT 498665 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | |||| ||| | || | Sbjct 498664 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGAAAGTGATGGTCT 498605 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || | |||||||||||| Sbjct 498604 TCCCCGTCAGGGTCTTCATGAAAATTTGCAT 498574 >seq22905 Length=498 Score = 98.7 bits (108), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 || || ||||| ||||||||||||| ||| || |||| || ||| ||||| | || Sbjct 260 AAGGTGGAAATAATTGCCAATGATC-AGGGGACTGAACCACCCCAAGCTATGTCACCTTT 318 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 || | || || || |||||||||| ||| | | |||| | | ||||| ||| Sbjct 319 ACTAACACCAGACGATTGATTGGTGATGCTGCATAGAACCAAGTCGCAATGAATCCCACC 378 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || |||||||||| |||| | |||||| |||| ||| ||||| | ||| ||| Sbjct 379 AACACGGTTTTTGATGCCAAACAACTTATTGGATGAAGATTTGATGATGCTGTTGTCCAG 438 Query 550229 GCAGATATGAAGCATTGGCCTTTC 550252 | | |||||| |||||||| ||| Sbjct 439 TCTGTTATGAAACATTGGCCCTTC 462 >seq350485 Length=1039438 Score = 96.9 bits (106), Expect = 3e-14 Identities = 95/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| ||||| |||| ||||| | | ||||| Sbjct 69690 ACAAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAGAGTACATCCATCTT 69633 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 69632 TCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 69573 Query 563384 G 563384 | Sbjct 69572 G 69572 >seq349101 Length=1240524 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||||||||| ||||| | ||||| || || || Sbjct 617727 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACC 617786 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| |||||||||| | ||||| | | || |||||||| || Sbjct 617787 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 617839 >seq350504 Length=2770520 Score = 93.3 bits (102), Expect = 3e-13 Identities = 159/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 1549896 CCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 1549953 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||||||||| ||||| Sbjct 1549954 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCAGGGGGAATG 1550013 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 1550014 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 1550072 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 1550073 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 1550118 >seq349183 Length=1390819 Score = 89.7 bits (98), Expect = 4e-12 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 ||||| ||||| || || || || || ||| | | ||| || ||||| |||| || | Sbjct 1325152 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGG--ATGTTGTAGTCAGACAGGG 1325209 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | |||||| || ||||| |||||||| || || || ||||| || || || || | Sbjct 1325210 TGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGC 1325269 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCG 563430 ||||||| ||||| || || || || ||| || || ||| || | | || || Sbjct 1325270 CTTCTTTTTCTTGTATCTTCCCCTTGACATTCTCGATGGTGTCACTGGGC-TCCACCTCC 1325328 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| | ||||||||||| || || || || || || ||||| Sbjct 1325329 AGAGTGATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 1325372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4009888283866670