Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30]
366,983 sequences; 2,836,166,969 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq350557 149 6e-31
seq350768 140 3e-28
seq350558 140 3e-28
seq350504 136 4e-27
seq349183 107 2e-18
seq350242 89.7 5e-13
seq348243 89.7 5e-13
seq348552 87.8 2e-12
seq350494 86.0 6e-12
seq365069 84.2 2e-11
seq350747 84.2 2e-11
>seq350557
Length=1960230
Score = 149 bits (164), Expect = 6e-31
Identities = 161/208 (77%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| ||||||||||| || ||| | | | ||||| ||
Sbjct 910666 AAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCTGACAGAGTGCGGCCA-TCCTCCAG 910724
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| ||||| ||| | || |||||||||||||| || |||||||| |||||||| |||
Sbjct 910725 CTGTTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT 910784
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | ||||| ||||| ||||||| || || | ||||| ||| ||||
Sbjct 910785 -TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGC 910843
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || || || ||||||||
Sbjct 910844 CCGTCAGGGTCTTCACAAAGATCTGCAT 910871
>seq350768
Length=2616046
Score = 140 bits (154), Expect = 3e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 1876409 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 1876467
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| ||||||||| || || ||||||||||| || |||||| ||
Sbjct 1876468 CGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCT 1876527
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 1876528 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 1876587
Query 133642 TTTTTACGAAAATCTGCAT 133660
|||| ||||| ||||||||
Sbjct 1876588 TTTTCACGAAGATCTGCAT 1876606
>seq350558
Length=1915597
Score = 140 bits (154), Expect = 3e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 1692689 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 1692747
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| ||||||||| || || ||||||||||| || |||||| ||
Sbjct 1692748 CGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCT 1692807
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 1692808 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 1692867
Query 133642 TTTTTACGAAAATCTGCAT 133660
|||| ||||| ||||||||
Sbjct 1692868 TTTTCACGAAGATCTGCAT 1692886
>seq350504
Length=2770520
Score = 136 bits (150), Expect = 4e-27
Identities = 151/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 1550148 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 1550206
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| ||||||||| || || ||||||||||| || |||||| ||
Sbjct 1550207 CGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCT 1550266
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 1550267 TCACGTTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGG 1550326
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 1550327 TCTTCACGAAGATCTGCAT 1550345
Score = 131 bits (144), Expect = 2e-25
Identities = 150/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||||||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 1549920 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 1549978
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| |||||| || || || ||||||||||| || |||||| ||
Sbjct 1549979 CGGCAAAGATGAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCT 1550038
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 1550039 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 1550098
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 1550099 TCTTCACGAAGATCTGCAT 1550117
>seq349183
Length=1390819
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||||||||| || ||||| || || ||| | || || ||||| || ||
Sbjct 1325176 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 1325235
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || |||| ||||||||| || ||||||||||| || || ||||| ||||
Sbjct 1325236 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCTTGTATCTTCCCCTTG 1325295
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||| | ||||| |||||||||| || | |||| |||||| || || || ||
Sbjct 1325296 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTTTTACCAGTGAGGGTC 1325355
Query 133644 TTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 1325356 TTCACAAAGATCTGCAT 1325372
>seq350242
Length=2039022
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| || || || | | | || || || ||||||||
Sbjct 795422 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 795480
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| || | |||||||| ||||| || |||||||| || |||||| |||
Sbjct 795481 AGCAAAAATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 795540
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | |||||| || |||| |||| ||| || | ||||| ||
Sbjct 795541 TACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTGATGGTCTTCCTCGTCAGGGT 795600
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 795601 CTTCACGAAAATCTGCAT 795618
>seq348243
Length=269726
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| || || || | | | || || || ||||||||
Sbjct 207252 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 207194
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || | |||||||| ||||| || |||||||| || |||||| |||
Sbjct 207193 AGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 207134
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | |||||| || |||| |||| ||| || || ||||| ||
Sbjct 207133 TACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTGATGGTCTTCCCCGTCAGGGT 207074
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 207073 CTTCACGAAAATCTGCAT 207056
>seq348552
Length=462899
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/199 (70%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| |||||||| || || ||| | | | ||| ||||| ||||
Sbjct 155217 GGTGGACTCTTTCTGGATATTGTATTCTGACAGAGTGCAGCAATTCTCCAGCTGTGTGCC 155158
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
| | |||| || |||| ||||| || |||||||| |||||||| ||| ||| || |
Sbjct 155157 CACAAAAATCAGATGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCTTGGAT-TTTGGCTT 155099
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||| ||||| || | ||| | ||| ||||| ||| |
Sbjct 155098 TGACATTCTCAGTGGTGTCACTGGGC------TCAAGGGTAATGGTCTTGCCCACCAGGG 155045
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || | || ||||||||
Sbjct 155044 TCTTCATAAAGATCTGCAT 155026
>seq350494
Length=1629883
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || || |||||||| || | || || | |||||||| ||||| || ||||||||
Sbjct 276065 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTA 276124
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||| | | || | || || | |||||| || |||| |||| |
Sbjct 276125 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCAACCTCGAGAGTGATG 276184
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || ||||| || || ||||||||||||||
Sbjct 276185 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 276219
>seq365069
Length=475
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| || || || | | | || || || ||||||||
Sbjct 219 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 161
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || | |||||||| ||||| || ||||| || || |||||| |||
Sbjct 160 AGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCTTTATCCTGGATCTTGGCCTT 101
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | |||||| || |||| |||| ||| || || ||||| ||
Sbjct 100 TACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTGATGGTCTTCCCCGTCAGGGT 41
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 40 CTTCACGAAAATCTGCAT 23
>seq350747
Length=3474718
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| || || || | | | || || || ||||||||
Sbjct 343423 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 343365
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || | |||||||| ||||| || |||||||| || |||||| |||
Sbjct 343364 AGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 343305
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | |||||| || |||| || | ||| || || ||||| ||
Sbjct 343304 TACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGAGTAATGGTCTTCCCCGTCAGGGT 343245
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 343244 CTTCACGAAAATCTGCAT 343227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481203209806920
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