Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bubalus_20bubalis_20[refseq_20GCF_5F000471725.1_202013-09-30] 366,983 sequences; 2,836,166,969 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq349435 102 1e-16 >seq349435 Length=571210 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||||| |||||||| || || ||| | || || | || || || ||| Sbjct 57760 TGTGGTGGTACTTTATATCTAAAGGAATTGAGTATTTGGACACGGTGTTTTTTATCCTGA 57701 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 | |||||| |||||||| ||| | ||||| || || || | |||||||||||| Sbjct 57700 GGAAGAAAAACAACCAAGTCTCTTTTCTTCACGTGTATCATCACTGTACCATGTTTACGC 57641 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGG 32832 | | ||||| || ||||| ||| ||||||||||||||| Sbjct 57640 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACAGG 57602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 600413836255920