Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq459 113 3e-20
seq8041 82.4 5e-11
>seq459
Length=3563100
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | || |||||||| |||||||| || || || ||| | ||
Sbjct 2214330 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 2214271
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||||||||| ||||||| ||||||||| || | || |||||| ||
Sbjct 2214270 TCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 2214211
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | || | | || || |||| ||||||||
Sbjct 2214210 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2214151
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || ||||| |||||||||||
Sbjct 2214150 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2214119
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | ||| | ||| |||||||| | || || ||||| |||||||| || ||
Sbjct 2214117 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 2214058
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||| ||||||||||||||| ||||||| ||||||||| ||
Sbjct 2214057 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 2213998
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||| || ||||| ||| | | | || | ||| | | || ||
Sbjct 2213997 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACC 2213938
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| |||||||| || || ||||| |||||||||||
Sbjct 2213937 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | ||| | ||| |||||||| | || || ||||| |||||||| || ||
Sbjct 2213889 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 2213830
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||| ||||||||||||||| ||||||| ||||||||| ||
Sbjct 2213829 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 2213770
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||| || ||||| ||| | || | || | || | | || ||
Sbjct 2213769 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 2213710
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| ||||| || | || ||||| |||||||||||
Sbjct 2213709 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2213663
>seq8041
Length=9355897
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||| ||| | ||| ||| ||||| ||||||||||| ||||| || | ||
Sbjct 8398529 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8398588
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | || |||||||||
Sbjct 8398589 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8398648
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 8398649 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8398708
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 8398709 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | || |||||||| ||||||||||| ||||| || | ||
Sbjct 8398985 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399044
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | || |||||||||
Sbjct 8399045 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399104
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 8399105 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399164
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 8399165 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | || |||||||| ||||||||||| ||||| || | ||
Sbjct 8399213 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399272
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | || |||||||||
Sbjct 8399273 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399332
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 8399333 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399392
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 8399393 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | || |||||||| ||||||||||| ||||| || | ||
Sbjct 8399441 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399500
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | || |||||||||
Sbjct 8399501 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399560
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 8399561 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399620
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 8399621 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | || |||||||| ||||||||||| ||||| || | ||
Sbjct 8399669 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399728
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | || |||||||||
Sbjct 8399729 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399788
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 8399789 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399848
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 8399849 CTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322932398064800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |