Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq7851 1898 0.0
seq3785 91.5 1e-13
seq1692 84.2 2e-11
>seq7851
Length=9529907
Score = 1898 bits (2104), Expect = 0.0
Identities = 1452/1723 (84%), Gaps = 49/1723 (3%)
Strand=Plus/Minus
Query 107071 GTCCTAACTCCAGTCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCAT 107130
||||||| |||| ||||||| || |||| ||| || |||||| | ||| |||||
Sbjct 3086700 GTCCTAATCCCAGCCCCAGCACGATCAGCT---TTGTAGGGTCAGGTGAGAGAACTCCAT 3086644
Query 107131 CCACA-------------AGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGA 107177
| || ||| || ||||| | || ||||||||||| ||||||| |||
Sbjct 3086643 CAGCAGGCTGGGTGTATGAGGATCCTAGGCGGATCTGGACTGAGGATACTTGTCTAGAGA 3086584
Query 107178 AGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGATGTTCT-------------GG 107224
||| |||| ||| |||||||| |||||||||||||||||||| ||
Sbjct 3086583 AGAAATCTGGTTTTGCCATCACTGTGGAGTTGAACTTGATGTTCCTTGAGCCCATTCAGG 3086524
Query 107225 ATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCACCTTGCCTG 107284
|||||||||||||| |||||||||||||||||| |||||| || |||||| |||| ||||
Sbjct 3086523 ATTAGTTTGTAATTGAAGGCATTTTGTTCTGTCTAAGGATTTCATCCTCCTCCTTCCCTG 3086464
Query 107285 TGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTG 107344
||| |||||||| | ||||||||| ||| ||||||| || ||||||||||||| | ||
Sbjct 3086463 TGCACAAACTCTGCCAATCTCCCATTCCACGAAGATGACTTGGTGGAAGAAGAAATTCTG 3086404
Query 107345 CCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAG 107404
|||| | |||||||||||||| ||||||||||||||||||||||| ||||| || ||||
Sbjct 3086403 CCGGAGGCATCATCTGTGGGCTTTGGGCTGCTATATGCTGCTGGCCCTTGTTGCTTTGAG 3086344
Query 107405 ACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCA 107464
|||||| ||||| | |||||||| |||| |||| |||||||||||||||||||||| ||
Sbjct 3086343 ACTTTCTCTCAGACTGAAATGTGACGTAGTTTCCCTGGATCTGGAGTCCAGGGACTTGCA 3086284
Query 107465 GAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCAT 107524
|| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 3086283 AAGCCAGCACTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGATCCAT 3086224
Query 107525 CAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAA 107584
|||||||||||||||||| ||||||||||||||||||||| || |||| ||||| |||||
Sbjct 3086223 CAACTGTTCTGGGATCACCCGAGGGGACCAGGAAGCAGTGATCAAGGCTCTCCTGGACAA 3086164
Query 107585 CCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAG 107644
|||||| || ||||| |||||| |||| |||| | ||| | ||||||||||| |||||
Sbjct 3086163 CCTGGAGGTCAAGAAGAAGCGGGAGCCTTTCACAGACACTGACTACCTCAACATGACCAG 3086104
Query 107645 AGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGA 107704
|||||||||| || |||||| |||||| |||||||| |||||||||||| ||||||||
Sbjct 3086103 GGACTGTGAGCAGTTTAAGGCCAAAAGGAGGTTCATACGGTTCCCACTGAGCAAAGAAGA 3086044
Query 107705 GCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACG 107764
||||||| ||||| || ||||| |||||||||||||||||| |||||||||||||| |
Sbjct 3086043 ATTAGACTTTCCCATCGCTTACTCTATGGTGGTCCATGAGAAGGTTGAAAACTTTGAAAG 3085984
Query 107765 GCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTC 107824
|||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct 3085983 GCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGTGTCCATGTAGATGAGAAGTC 3085924
Query 107825 CCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCAT 107884
|||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 3085923 CCCAGAAACTTTCAAAGAGGCAGTCAAGGCCATTATTTCATGCTTCCCGAATGTCTTCAT 3085864
Query 107885 GGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAA 107944
||||||||| ||||| | |||||||||||||||||||||||| ||||| |||||||||||
Sbjct 3085863 GGCCAGTAAATTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTGAA 3085804
Query 107945 CTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGG 108004
|||||||||||||||||||| |||| | ||||| ||||| ||||||||||| || |||||
Sbjct 3085803 CTGTATGGAAGACTTGCTCCGGAGCCCGGTGCCGTGGAAATACTTACTGAACACCTGCGG 3085744
Query 108005 GACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGG 108064
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3085743 GACAGACTTTCCTATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAATGG 3085684
Query 108065 TAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCG 108124
||||||||||||||||| ||| ||||| |||||| |||||| | |||||||||||| |
Sbjct 3085683 GAAGAACAGTATGGAGTCAGAGATACCTACTGAGTACAAAAAGACTCGCTGGAAATATCA 3085624
Query 108125 CTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAA 108184
||| || ||||||||||| || | |||| |||||||||||||||||||||||||||
Sbjct 3085623 CTACGAAGTGACAGACACGTTGCAAGTAACCAACAAGATGAAGGACCCTCCCCCTGATAA 3085564
Query 108185 TTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGT 108244
|||||| |||||||| |||||||||||| ||||||| ||||||| |||| ||||||||||
Sbjct 3085563 TTTACCTATGTTCACGGGGAATGCCTATATTGTGGCTTCTCGAGGCTTTATCCAACATGT 3085504
Query 108245 CTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGA 108304
|||||| ||||| ||||||||| | ||| ||||||||| |||||||||||||||||||||
Sbjct 3085503 CTTAGAGAACCCCAAATCCCAACGGCTGATTGAATGGGCCAAAGACACCTATAGCCCCGA 3085444
Query 108305 CGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCA 108364
|||||||||||||| |||||||||||||| || |||||||||||||||||||| |||
Sbjct 3085443 TGAACACCTCTGGGCTACCCTTCAGCGTGCACCATGGATGCCTGGCTCTGTTCCCTACCA 3085384
Query 108365 CCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCA 108424
|||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 3085383 CCCCAAGTTTCACATCTCAGACATGATGGCCATCGCCAGGCTGGTCAAGTGGCAAGACCA 3085324
Query 108425 CGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGC 108484
||||||||| |||| |||||||| |||||||| || |||||||||||||| | | ||||
Sbjct 3085323 CGAGGGAGACATCAGTATGGGGGCACCTTATGCCCCTTGCTCTGGAATCCACCAGCGGGC 3085264
Query 108485 CATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGC 108544
|||| |||| ||||| ||||||||| ||||||||||||||||||||||||| |||||
Sbjct 3085263 TGTCTGTGTTTATGGGGCTGGGGACCTGCACTGGATTCTCCAGAACCATCACCTGTTGGC 3085204
Query 108545 AAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACG 108604
|||||||||||||| | |||||||||||| || || ||||||||||||||||| ||||
Sbjct 3085203 TAACAAGTTTGACCCCAAGGTGGATGATAATGTTCTTCAGTGCTTAGAAGAGTATTTACG 3085144
Query 108605 TCATAAGGCCATCTATGGGACTGAACTTTGAG----------------CTGC--ACTGTG 108646
||||||||||||||||| ||||||| |||| |||| | | |
Sbjct 3085143 CTATAAGGCCATCTATGGGGCTGAACTCTGAGATACACCTTGAGAGAACTGCTACCCGAG 3085084
Query 108647 GGCCAGGGACTG-TGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGA 108705
|| |||| || | || |||||||| ||| ||| |||| || |||||||| || |||
Sbjct 3085083 GGGCAGGAACAGATGTAAACATGCCTAGGACGTGCTGGGACATTGTGGGGT-GGAGACCG 3085025
Query 108706 GGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748
||||| ||||||||| |||||||||| | | || || |||||
Sbjct 3085024 GGGCTCTGGAATCCACGGCATCCCCCGGTGGAAGGGGACTGCT 3084982
>seq3785
Length=24937548
Score = 91.5 bits (100), Expect = 1e-13
Identities = 196/286 (69%), Gaps = 8/286 (3%)
Strand=Plus/Plus
Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335
|| |||| ||||| || || ||||| ||||| | ||||||||||| ||||| | | |
Sbjct 6510637 GAGTGGGCAAAAGATACATACAGCCCAGACGAGTATCTCTGGGCCACTATTCAGAG-GAT 6510695
Query 108336 CCGTGGA-TGCCTGGCTC--TGTTCCTAGCCACCCCAAGTATCACATCTCAGACATG-AC 108391
| || | | || ||||| ||| | || | ||||| |||| ||||||||| ||
Sbjct 6510696 GCCTGAAGTCCCAGGCTCACTGTCCTTAAGTTCT--AAGTACGACATGTCAGACATGCAC 6510753
Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451
| | || |||||| | || |||||||||||| || || || || || ||| || ||
Sbjct 6510754 T-CTATTGCCAGGTTTGTTAAGTGGCAGTACTTTGAAGGTGACGTTTCCAAGGGCGCCCC 6510812
Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511
|| | || ||| || ||||| | | | | || ||| ||| ||||| ||| |
Sbjct 6510813 CTACCCGCCGTGCAGCGGCATCCACGTGCGCTCTGTATGTGTTTTCGGAGCCGGTGACTT 6510872
Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557
| ||||||| || || || ||||| || || || |||||||||
Sbjct 6510873 GAACTGGATGCTGCACGTGCACCACCTGTTTGCCAATAAGTTTGAC 6510918
>seq1692
Length=15556111
Score = 84.2 bits (92), Expect = 2e-11
Identities = 231/343 (67%), Gaps = 22/343 (6%)
Strand=Plus/Minus
Query 107697 AAAGAAGA-GCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAA 107755
|||||||| ||| ||||| || | || ||| ||||| ||||| | || | || ||
Sbjct 12828617 AAAGAAGAAGCT-GACTTTCCTTTGGCATACATTATGGTCATCCATCATAATTTCGATAA 12828559
Query 107756 CTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGA 107815
||||| | |||| | | || | || |||||||| | |||||||| || |||||
Sbjct 12828558 CTTTGCAAGGCTCTTCAGGGCAATTTACATGCCTCAGAATGTTTACTGTGTTCATGTGGA 12828499
Query 107816 TGTGAAGTCCCCAGA-GACTTTCAAAGAGGCGGTCAAGGCCATTATTTC-CTGCTTCCCC 107873
|| ||| | ||| || ||| ||||| || || || |||| | |||||||||
Sbjct 12828498 TGAGAAAGCGACAGTTGAATTT-AAAGATGCAGTGGAGAA-ATTACTGGGCTGCTTCCCA 12828441
Query 107874 AATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGG----TCCAGAGT 107929
|||| ||| |||| ||| ||| || ||||| |||| ||| ||||| |
Sbjct 12828440 AATGCCTTTCTGGCTTCCAAGATGGAGCCAGTGGTCTATGG----TGGGATTTCCAGGCT 12828385
Query 107930 GCAAGCTGACCTGAACTGTATGGAAGA-CTT---GCTCCAGAGCTCAGTGCCATGGAAGT 107985
|| |||||||||||||| || |||| ||| || |||| ||||| |||||||
Sbjct 12828384 CCAGGCTGACCTGAACTGCATCAAAGATCTTACAGCCTTAGAG----GTGCCCTGGAAGT 12828329
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028
|| | || || |||||| || |||||| | || |||||
Sbjct 12828328 ACGCCATCAACACCTGCGGGCAGGATTTCCCCCTGAAAACCAA 12828286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348118310330670
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