Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23] 35,455 sequences; 1,992,663,268 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1473 232 5e-56 >seq1473 Length=14027634 Score = 232 bits (256), Expect = 5e-56 Identities = 533/800 (67%), Gaps = 7/800 (1%) Strand=Plus/Minus Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037 || || || || || || || | || || || || ||||| | || || | | | ||| Sbjct 9373245 GACCGCACGGGCACCGGCACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTCAGA 9373186 Query 20038 AATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTA 20097 |||||||||| | | || || ||||| || || ||||| || ||| | || || || Sbjct 9373185 GATGAATTTCCACTGCTCACAACCAAACGTGTTTTCTGGAAGGGTGTTTTGGAGGAATTG 9373126 Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATT 20157 | |||||||| || ||||| ||||| ||| ||||| || ||||| || || Sbjct 9373125 CTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAGCTGTCTTCCAAGGGAGTGAAAATC 9373066 Query 20158 TGGAGCGCACATGGATCT--AAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAG 20215 ||| ||| ||| || | || | || ||||| ||||| || | | || Sbjct 9373065 TGGGACGCCAGTGGGTCCCGAGGCG--TCTTGGACAGCCTGGGATTCTCCACCAG---AG 9373011 Query 20216 AGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTG 20275 | || ||| | || || || || | ||||| ||||| |||||||| || ||||| | | Sbjct 9373010 AAGGAGATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAG 9372951 Query 20276 ACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAA 20335 | | | | || |||||| || |||||||||| ||| | || || || | | | || Sbjct 9372950 ATACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAA 9372891 Query 20336 TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGC 20395 | ||||| ||||| || ||||||||||| || | || |||||||| | ||| | | | Sbjct 9372890 TCAAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCC 9372831 Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAAT 20455 | | | ||| | || || || ||| || ||||| || ||||| | || ||| Sbjct 9372830 CGCTCACGGCCCTCCCACCCTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGC 9372771 Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515 |||| || || ||||| | || || | || ||||| ||||| || || ||||| || | Sbjct 9372770 TGTCCTGCCAGCTGTATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCG 9372711 Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACT 20575 | || || | ||||| || || ||||||||||| | |||| | || | |||||| Sbjct 9372710 CCAGCTACTCTCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACC 9372651 Query 20576 TAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTAC 20635 | || ||||| | ||||| || || |||||||| ||||| | || || | ||| | | Sbjct 9372650 TTGTACACACTTTGGGAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGC 9372591 Query 20636 AGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATA 20695 || | | ||| |||||| | ||||| | || || ||||| ||| | | | Sbjct 9372590 AGCTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGTTGAGAAAA 9372531 Query 20696 TTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTC 20755 | | | || || ||||| || ||| | | ||||| || ||||| ||| | ||| Sbjct 9372530 CTGATGGCTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATTA 9372471 Query 20756 CAATGGAAATGTCTGTTTAA 20775 |||||||||| |||||||| Sbjct 9372470 AAATGGAAATGGCTGTTTAA 9372451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399011509474975