Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 232 5e-56
>seq1473
Length=14027634
Score = 232 bits (256), Expect = 5e-56
Identities = 533/800 (67%), Gaps = 7/800 (1%)
Strand=Plus/Minus
Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037
|| || || || || || || | || || || || ||||| | || || | | | |||
Sbjct 9373245 GACCGCACGGGCACCGGCACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTCAGA 9373186
Query 20038 AATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTA 20097
|||||||||| | | || || ||||| || || ||||| || ||| | || || ||
Sbjct 9373185 GATGAATTTCCACTGCTCACAACCAAACGTGTTTTCTGGAAGGGTGTTTTGGAGGAATTG 9373126
Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATT 20157
| |||||||| || ||||| ||||| ||| ||||| || ||||| || ||
Sbjct 9373125 CTGTGGTTTATCAAGGGATCCACAAACGCTAAGGAGCTGTCTTCCAAGGGAGTGAAAATC 9373066
Query 20158 TGGAGCGCACATGGATCT--AAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAG 20215
||| ||| ||| || | || | || ||||| ||||| || | | ||
Sbjct 9373065 TGGGACGCCAGTGGGTCCCGAGGCG--TCTTGGACAGCCTGGGATTCTCCACCAG---AG 9373011
Query 20216 AGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTG 20275
| || ||| | || || || || | ||||| ||||| |||||||| || ||||| | |
Sbjct 9373010 AAGGAGATCTAGGCCCAGTATACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAG 9372951
Query 20276 ACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAA 20335
| | | | || |||||| || |||||||||| ||| | || || || | | | ||
Sbjct 9372950 ATACGGATTCAGATTATTCAGGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAA 9372891
Query 20336 TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGC 20395
| ||||| ||||| || ||||||||||| || | || |||||||| | ||| | | |
Sbjct 9372890 TCAAAACCAACCCTAATGACAGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCC 9372831
Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAAT 20455
| | | ||| | || || || ||| || ||||| || ||||| | || |||
Sbjct 9372830 CGCTCACGGCCCTCCCACCCTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGC 9372771
Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515
|||| || || ||||| | || || | || ||||| ||||| || || ||||| || |
Sbjct 9372770 TGTCCTGCCAGCTGTATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCG 9372711
Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACT 20575
| || || | ||||| || || ||||||||||| | |||| | || | ||||||
Sbjct 9372710 CCAGCTACTCTCTGCTCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACC 9372651
Query 20576 TAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTAC 20635
| || ||||| | ||||| || || |||||||| ||||| | || || | ||| | |
Sbjct 9372650 TTGTACACACTTTGGGAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGC 9372591
Query 20636 AGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATA 20695
|| | | ||| |||||| | ||||| | || || ||||| ||| | | |
Sbjct 9372590 AGCTTCCGCGAGAACCAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGTTGAGAAAA 9372531
Query 20696 TTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTC 20755
| | | || || ||||| || ||| | | ||||| || ||||| ||| | |||
Sbjct 9372530 CTGATGGCTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATTA 9372471
Query 20756 CAATGGAAATGTCTGTTTAA 20775
|||||||||| ||||||||
Sbjct 9372470 AAATGGAAATGGCTGTTTAA 9372451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399011509474975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |