Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 100 3e-16
seq459 89.7 5e-13
>seq8041
Length=9355897
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | ||||| || | ||| | || |||||||| || ||||| || ||
Sbjct 8398970 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399029
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| | ||||| |||||||| || ||| |||||| | ||||| || || ||
Sbjct 8399030 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399089
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| || || | | || | ||||| ||||||||||
Sbjct 8399090 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 8399149
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||| || ||||| || || ||||| || |||||
Sbjct 8399150 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | ||||| || | ||| | || |||||||| || ||||| || ||
Sbjct 8399198 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399257
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| | ||||| |||||||| || ||| |||||| | ||||| || || ||
Sbjct 8399258 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399317
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| || || | | || | ||||| ||||||||||
Sbjct 8399318 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 8399377
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||| || ||||| || || ||||| || |||||
Sbjct 8399378 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | ||||| || | ||| | || |||||||| || ||||| || ||
Sbjct 8399426 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399485
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| | ||||| |||||||| || ||| |||||| | ||||| || || ||
Sbjct 8399486 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399545
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| || || | | || | ||||| ||||||||||
Sbjct 8399546 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 8399605
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||| || ||||| || || ||||| || |||||
Sbjct 8399606 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | ||||| || | ||| | || |||||||| || ||||| || ||
Sbjct 8399654 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 8399713
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| | ||||| |||||||| || ||| |||||| | ||||| || || ||
Sbjct 8399714 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8399773
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| || || | | || | ||||| ||||||||||
Sbjct 8399774 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 8399833
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||| || ||||| || || ||||| || |||||
Sbjct 8399834 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || | ||| |||| || ||||| | || || || || || ||||| || || |
Sbjct 8398515 CCTCCCCTTAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 8398574
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| | ||||| |||||||| |||||| |||||| | ||||| || || ||
Sbjct 8398575 AGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8398634
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||| |||||||||||
Sbjct 8398635 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 8398694
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | ||||| || ||||| || || ||||| || |||||
Sbjct 8398695 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | ||||| || | ||| | || ||||| || || ||||| || ||
Sbjct 8398742 GCCCCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 8398801
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| | ||||| |||||||| || ||| |||||| | ||||| || || ||
Sbjct 8398802 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 8398861
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| || || | | || | ||||| ||||||||||
Sbjct 8398862 GATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 8398921
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||| || ||||| || || ||||| || |||||
Sbjct 8398922 CTCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
>seq459
Length=3563100
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608
||||| || | ||| | || ||||| || || ||||| ||||| | ||||
Sbjct 2214106 ACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCC 2214047
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
||||| ||||| || || || |||| || | ||||| || ||||| |||||||| ||
Sbjct 2214046 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTT 2213987
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| || || | | || | |||||| | ||||||||||| | ||| |
Sbjct 2213986 ATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGAT 2213927
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||||||||||| || || ||||| || ||||||
Sbjct 2213926 GGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 2213890
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| ||||| ||||| || ||
Sbjct 2214315 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 2214256
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||| || | ||||| || ||||| ||||| || || || ||| || ||
Sbjct 2214255 GCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 2214196
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | ||||||||||||| ||
Sbjct 2214195 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 2214136
Query 139748 TTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 2214135 TTCACGAAGATCTGCATA 2214118
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608
||||| || | ||| | || ||||| || || ||||| ||||| | ||||
Sbjct 2213878 ACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCC 2213819
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
||||| ||||| || || || |||| || | ||||| || ||||| ||||| || ||
Sbjct 2213818 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTT 2213759
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| || || | | || | ||||| ||||||||||||| | ||| |
Sbjct 2213758 ATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 2213699
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| ||||| || || ||||| || |||||
Sbjct 2213698 GGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2213663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495844150636000
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