Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1473 165 1e-35
>seq1473
Length=14027634
Score = 165 bits (182), Expect = 1e-35
Identities = 405/607 (67%), Gaps = 13/607 (2%)
Strand=Plus/Minus
Query 70025 CGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTG 70084
||| |||| ||||| || || ||| || |||| ||| | ||||| || |||||
Sbjct 9373047 CGAGGCGTCTTGGACAGCCTGGGATTCTCCACCAGAGAAG---GAGATCTAGGCCCAGTA 9372991
Query 70085 TACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCG 70144
||| | || ||||||||||| | || || | || | ||| || |||| |||||
Sbjct 9372990 TACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAGATACGGATTCAGATTATTCA 9372931
Query 70145 GGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGAT 70204
|| | || || || ||| |||||| | | |||||| |||| ||||| || | ||
Sbjct 9372930 GGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAATCAAAACCAACCCTAATGAC 9372871
Query 70205 AGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCG 70264
|| || ||| | ||||| | |||||||| | | | | | | ||| || |||||
Sbjct 9372870 AGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCCCGCTCACGGCCCTCCCACCC 9372811
Query 70265 TGTCACTGT--TTGGCTCAGTTTTAC-TCGT--ACGATGGCAAATTGTCATGCTTAATGT 70319
|| || || || || ||||| ||| | || ||| || | |||| ||| |||
Sbjct 9372810 TGCCA-TGCCCTTTGC-CAGTTCTACGTGGTGAACGGTG---AGCTGTCCTGCCAGCTGT 9372756
Query 70320 ATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGT 70379
|| || || | ||||||||||| || || ||||| ||||| || ||||| ||| ||
Sbjct 9372755 ATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAGCTACTCTCTGC 9372696
Query 70380 TGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTG 70439
| || |||||||||| ||||| || |||||||| | || | |||||||| | |
Sbjct 9372695 TCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACCTTGTACACACTTTGG 9372636
Query 70440 GCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGC 70499
| || || ||| | || | ||||||| |||||| | || |||| || || || |
Sbjct 9372635 GAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGCAGCTTCCGCGAGAAC 9372576
Query 70500 CGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGT 70559
| || ||||| || ||||| | | ||| |||||||| || | ||| | || |||
Sbjct 9372575 CAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGTTGAGAAAACTGATGGCTTCAAGG 9372516
Query 70560 ACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTG 70619
||||| ||| || |||| ||| |||| | || | ||| |||| ||||||
Sbjct 9372515 CTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATTAAAATGGAAATGGCTG 9372456
Query 70620 TTTAGAG 70626
|||| ||
Sbjct 9372455 TTTAAAG 9372449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740730771825800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |