Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23] 35,455 sequences; 1,992,663,268 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1473 165 1e-35 >seq1473 Length=14027634 Score = 165 bits (182), Expect = 1e-35 Identities = 405/607 (67%), Gaps = 13/607 (2%) Strand=Plus/Minus Query 70025 CGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTG 70084 ||| |||| ||||| || || ||| || |||| ||| | ||||| || ||||| Sbjct 9373047 CGAGGCGTCTTGGACAGCCTGGGATTCTCCACCAGAGAAG---GAGATCTAGGCCCAGTA 9372991 Query 70085 TACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCG 70144 ||| | || ||||||||||| | || || | || | ||| || |||| ||||| Sbjct 9372990 TACCGCTTTCAGTGGAGGCATTTTGGGGCCGAATACGAAGATACGGATTCAGATTATTCA 9372931 Query 70145 GGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGAT 70204 || | || || || ||| |||||| | | |||||| |||| ||||| || | || Sbjct 9372930 GGCAAAGGAGTAGACCAACTGCAGAAGGTGACTGACACAATCAAAACCAACCCTAATGAC 9372871 Query 70205 AGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCG 70264 || || ||| | ||||| | |||||||| | | | | | | ||| || ||||| Sbjct 9372870 AGAAGAATCATCATGTGTGCCTGGAATCCAAAACACCTCCCGCTCACGGCCCTCCCACCC 9372811 Query 70265 TGTCACTGT--TTGGCTCAGTTTTAC-TCGT--ACGATGGCAAATTGTCATGCTTAATGT 70319 || || || || || ||||| ||| | || ||| || | |||| ||| ||| Sbjct 9372810 TGCCA-TGCCCTTTGC-CAGTTCTACGTGGTGAACGGTG---AGCTGTCCTGCCAGCTGT 9372756 Query 70320 ATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGT 70379 || || || | ||||||||||| || || ||||| ||||| || ||||| ||| || Sbjct 9372755 ATGAGCGGTCAGGAGACATGGGCCTGGGCGTGCCCTTCAACATCGCCAGCTACTCTCTGC 9372696 Query 70380 TGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTG 70439 | || |||||||||| ||||| || |||||||| | || | |||||||| | | Sbjct 9372695 TCACCTACATGATTGCACACATCACAGGCCTGAAGCCAGGTGACCTTGTACACACTTTGG 9372636 Query 70440 GCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGC 70499 | || || ||| | || | ||||||| |||||| | || |||| || || || | Sbjct 9372635 GAGATGCACACATTTACCTGAATCACACTGAGCCACTGAAAATGCAGCTTCCGCGAGAAC 9372576 Query 70500 CGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGT 70559 | || ||||| || ||||| | | ||| |||||||| || | ||| | || ||| Sbjct 9372575 CAAGGCCTTTCCCGAAGCTCAAAATGCTTCGAAAAGTTGAGAAAACTGATGGCTTCAAGG 9372516 Query 70560 ACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTG 70619 ||||| ||| || |||| ||| |||| | || | ||| |||| |||||| Sbjct 9372515 CTGAAGACTTTCAGATTGAAGGCTACAATCCTCATCCGACTATTAAAATGGAAATGGCTG 9372456 Query 70620 TTTAGAG 70626 |||| || Sbjct 9372455 TTTAAAG 9372449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740730771825800