Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3552 96.9 3e-15
seq4088 87.8 2e-12
>seq3552
Length=199577
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| | ||||| ||||| ||| || || ||||||| | || || ||| | |
Sbjct 80965 ATGCAGGTCTTTGTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 80906
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| | ||| | || |||| |||| || ||||| || || || |||||||||
Sbjct 80905 GACACCACTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 80849
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| |||| | |||||||| ||||||| | || |||| ||||||| || |||
Sbjct 80848 CAGCAGCATCTGATTTTTGCGAGCAAACAGCTGGAGGATGGTCGCACTCCATCAGACTAC 80789
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| ||||| ||||| || || || |||||
Sbjct 80788 AATATTCAGAAAGAGTCCACCCTGCACTTGGTGCT 80754
>seq4088
Length=12000580
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|| || || ||||| ||||| |||| || || | ||||| |||| || ||||| ||
Sbjct 9606616 ATACAGATCTTTGTGAAGACCCTGACAGGCAAGACTATCACCCTCGAGGTTGAGTCCACT 9606557
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| | || | || |||| | || || ||||| || || || |||||||||
Sbjct 9606556 GACACCAATAAG--AATGTCAAAGCTACAA-TCTAAGACAAGGAGGGCATCCCACCTGAC 9606500
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| |||| | ||||| | || ||||| | || |||| || ||| || ||||||
Sbjct 9606499 CAGCAGCATCTGATTTTCACGGGGAAACAGCTGGAGGATGGCCGTACTCTGTCAGATTAC 9606440
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| |||| ||||| ||||| | |||| ||||||
Sbjct 9606439 GATGTTCAGAAAGAGTCCACCTTGCATTCAGTGCT 9606405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433140755585825
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |