Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 181 2e-40
seq459 176 8e-39
seq3552 111 3e-19
seq4088 98.7 2e-15
seq5766 84.2 4e-11
>seq8041
Length=9355897
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || ||||||||||| |||||||| || || || || || | |
Sbjct 8398980 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8399039
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 8399040 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 8399099
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 8399100 TTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 8399159
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| | |||||| ||||| ||||||||
Sbjct 8399160 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || ||||||||||| |||||||| || || || || || | |
Sbjct 8399208 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8399267
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 8399268 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 8399327
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 8399328 TTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 8399387
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| | |||||| ||||| ||||||||
Sbjct 8399388 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || ||||||||||| |||||||| || || || || || | |
Sbjct 8399436 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8399495
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 8399496 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 8399555
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 8399556 TTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 8399615
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| | |||||| ||||| ||||||||
Sbjct 8399616 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 181 bits (200), Expect = 2e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || ||||||||||| |||||||| || || || || || | |
Sbjct 8399664 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8399723
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 8399724 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 8399783
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 8399784 TTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 8399843
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| | |||||| ||||| ||||||||
Sbjct 8399844 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 178 bits (196), Expect = 2e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || |||||||| || |||||||| || || || || || | |
Sbjct 8398752 AGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8398811
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 8398812 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 8398871
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 8398872 TTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 8398931
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| | |||||| ||||| ||||||||
Sbjct 8398932 ATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | | ||||| |||||||| || ||||| || || |||||||| || || ||
Sbjct 8398515 CCTCCCCTTAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 8398574
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||||||| | ||| ||||| || || || | || || ||||| || ||
Sbjct 8398575 AGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8398634
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||| ||||||||| |||||||||||| | || ||
Sbjct 8398635 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 8398694
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || ||||| | |||||| ||||| ||||||||
Sbjct 8398695 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
>seq459
Length=3563100
Score = 176 bits (194), Expect = 8e-39
Identities = 172/219 (79%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || || ||||| || |||||||| ||||| || || || |
Sbjct 2214108 AGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGG 2214049
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || ||||| ||||| || || ||||| || || |||||||||
Sbjct 2214048 CCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 2213989
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
|| || || ||||| ||||| ||| |||||||||||| ||| | || || |||| |||
Sbjct 2213988 TTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC-GCTAGGCTCCACCTCCAGGGT 2213930
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || |||||||| ||||| ||||||||
Sbjct 2213929 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
Score = 167 bits (184), Expect = 4e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || || ||||| || |||||||| ||||| || || || |
Sbjct 2213880 AGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGG 2213821
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || ||||| ||||| || || ||||| || || ||||| |||
Sbjct 2213820 CCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCC 2213761
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|| || || ||||| ||||| || |||||||||||| | || || |||| ||||
Sbjct 2213760 TTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 2213701
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
||||| || ||||| | |||||| ||||| ||||||||| ||
Sbjct 2213700 ATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATTTTG 2213659
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || |||||||| |||||||| ||||| || || || | ||||||||
Sbjct 2214327 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 2214268
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || ||||| ||||| || || ||||| || || ||||| ||||| || ||
Sbjct 2214267 AGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGG 2214208
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| || |||||||||||| | || || |||| ||||||||| ||
Sbjct 2214207 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 2214148
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 2214147 CCGGTCAGGGTCTTCACGAAGATCTGCAT 2214119
>seq3552
Length=199577
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| || || || || || || | || | ||||| ||
Sbjct 80757 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTCC 80816
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || | || || || || || ||||| ||||| ||||| |||||||||||
Sbjct 80817 AGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 80876
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| ||| ||||||| | || || || | ||||||||| ||
Sbjct 80877 ATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTG 80936
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| | |||||||| || || | ||||||
Sbjct 80937 CCCATCAGGGTCTTCACAAAGACCTGCAT 80965
>seq4088
Length=12000580
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||||||||| || | | ||||| || || || | ||||| || | ||| |||||
Sbjct 9606420 GTGGACTCTTTCTGAACATCGTAATCTGACAGAGTACGGCCATCCTCCAGCTGTTTCCCC 9606479
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
| ||| || || || ||||| ||||| ||||| |||||||||| || | || |||
Sbjct 9606480 GTGAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTAGATTGTAGCTTTG 9606539
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| || ||||||| | || || || || | |||||| || || || || ||||||
Sbjct 9606540 ACATTCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTGATAGTCTTGCCTGTCAGGGTC 9606599
Query 68445 TTGACGAATATCTGCAT 68461
|| || || ||||| ||
Sbjct 9606600 TTCACAAAGATCTGTAT 9606616
>seq5766
Length=15090592
Score = 84.2 bits (92), Expect = 4e-11
Identities = 110/150 (73%), Gaps = 3/150 (2%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || |||| || |||||||| |||| || ||| | |||||||||
Sbjct 2920744 ACCAGGTGCAGGGTTGACT--TTCTGGATGTTGTAATTAGAAAGTATGAGGCCATCTTCT 2920801
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG-GTGGAATGCCTTCCTTGTCTTG 68371
| ||| || | || || ||||| || || ||| || | || ||||| ||||| || ||
Sbjct 2920802 AGCTGTTTGACTGCAAAGATGAGCCTCTGCTGGCTGGTGGGGGATGCCGTCCTTATCCTG 2920861
Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
||||||||||| || ||||||| ||||
Sbjct 2920862 GATCTTTGCCTTCACATTCTCGATGATGTC 2920891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921213948472600
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