Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq6502 87.8 3e-12
seq4475 84.2 4e-11
>seq6502
Length=3845251
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
||||||||| |||| || || || |||||||| || || | || || || || ||||||
Sbjct 1108098 GTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGG 1108039
Query 42768 CTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
|||||| || ||| | |||||| || ||||| || || || ||||| || ||||| ||
Sbjct 1108038 CTCAAGAAGCGAGGACT-GATGCCGGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 1107980
Query 42827 CGAGG 42831
|||||
Sbjct 1107979 CGAGG 1107975
>seq4475
Length=11054148
Score = 84.2 bits (92), Expect = 4e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| || ||| |||| |||||| | || || || || || |||||||| ||| | || ||
Sbjct 3068460 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCAGGCTCTTTTGCT 3068401
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
| || || ||||| ||| ||| |||| | ||||| || ||||| || || || |||||
Sbjct 3068400 GCTATATTTTGGCTGAAGAAGAGAGGTCTT-ATGCCTGGCCTCACTTTTTCCAATGAACT 3068342
Query 42815 CATCAGCAGGGACGA 42829
||||||||| || ||
Sbjct 3068341 CATCAGCAGAGATGA 3068327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943920680670800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |