Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq459 129 1e-24
seq2669 107 5e-18
>seq459
Length=3563100
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || ||||| || ||||| | || || |||||||||
Sbjct 2214081 TCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAG 2214022
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| ||||| ||||||||||| || || ||||||||
Sbjct 2214021 ATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTC 2213962
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||||| | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 2213961 TCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 2213902
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2213901 AAGATCTGCAT 2213891
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || |||||||||
Sbjct 2214309 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAG 2214250
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || || ||||||||||| || || ||||| ||
Sbjct 2214249 ATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTC 2214190
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 2214189 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 2214130
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2214129 AAGATCTGCAT 2214119
Score = 109 bits (120), Expect = 1e-18
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || ||||| || ||||| | || || |||||||||
Sbjct 2213853 TCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAG 2213794
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || || ||||||||||| || || ||||| ||
Sbjct 2213793 ATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTC 2213734
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| || |||| ||||| |||
Sbjct 2213733 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACG 2213674
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 2213673 AAGATCTGCATTTTG 2213659
>seq2669
Length=6508339
Score = 107 bits (118), Expect = 5e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351
||||| ||||| | || |||| || || |||| ||||| || | || |||||| ||
Sbjct 4562072 ATATTGTAGTCTGACAGAGTGCAGCCATCCTCTAGCTGTTTGCCCACAAAAATCAGATGC 4562013
Query 288352 TGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAA 288411
|| ||| | |||||| || || || ||||||||||| ||||| || || || | |
Sbjct 4562012 TGCTGATCAGGTGGGATGCCCTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAGTGGTG 4561953
Query 288412 TCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471
|| || | || || ||||| ||||| ||||| || ||||| ||||| || || ||||||
Sbjct 4561952 TCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGC 4561893
Query 288472 AT 288473
||
Sbjct 4561892 AT 4561891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179118521713490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |