Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 105 6e-18
seq459 98.7 9e-16
seq2669 95.1 1e-14
seq4088 87.8 2e-12
seq3552 86.0 6e-12
>seq8041
Length=9355897
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || | ||| |||| ||||| || | || || || || || || ||||| || |
Sbjct 8398515 CCTCCCCTTAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 8398574
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || |||||||| ||||| ||||||| | |||||| || || ||
Sbjct 8398575 AGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8398634
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|||||||||||||| ||| ||| ||||| | |||| |||||| | ||| ||
Sbjct 8398635 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 8398694
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | ||| | || || || |||| || || || || |||||||||
Sbjct 8398695 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8398742
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || |||||||| || || ||||| || || ||||| |
Sbjct 8398983 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399042
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || |||||||| || || ||||||| | |||||| || || || ||||||||||||
Sbjct 8399043 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399102
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| ||| ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 8399103 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399162
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || || |||| || || || || |||||||||
Sbjct 8399163 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399198
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || |||||||| || || ||||| || || ||||| |
Sbjct 8399211 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399270
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || |||||||| || || ||||||| | |||||| || || || ||||||||||||
Sbjct 8399271 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399330
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| ||| ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 8399331 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399390
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || || |||| || || || || |||||||||
Sbjct 8399391 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399426
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || |||||||| || || ||||| || || ||||| |
Sbjct 8399439 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399498
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || |||||||| || || ||||||| | |||||| || || || ||||||||||||
Sbjct 8399499 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399558
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| ||| ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 8399559 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399618
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || || |||| || || || || |||||||||
Sbjct 8399619 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399654
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || |||||||| || || ||||| || || ||||| |
Sbjct 8399667 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8399726
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || |||||||| || || ||||||| | |||||| || || || ||||||||||||
Sbjct 8399727 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8399786
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| ||| ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 8399787 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8399846
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || || |||| || || || || |||||||||
Sbjct 8399847 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8399882
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || || ||||| |
Sbjct 8398755 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 8398814
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || |||||||| || || ||||||| | |||||| || || || ||||||||||||
Sbjct 8398815 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 8398874
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| ||| ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 8398875 TCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 8398934
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || || |||| || || || || |||||||||
Sbjct 8398935 GTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATG 8398970
>seq459
Length=3563100
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||| || || |||||||| | ||||| ||| || ||||| || ||
Sbjct 2214315 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 2214256
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | | |||||| || ||||| ||||||||||| ||| ||| || |||
Sbjct 2214255 GCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 2214196
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | ||| || || | ||| | || ||||||||||| ||
Sbjct 2214195 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 2214136
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 2214135 TTCACGAAGATCTGCAT 2214119
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || |||||||| | ||||| |
Sbjct 2214105 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA 2214046
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || ||| |||| | | |||||| || ||||| ||||| |||||
Sbjct 2214045 TCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTA 2213986
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||| | | |||| |||||| || ||| || || | ||| |
Sbjct 2213985 TCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATG 2213926
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||||||||| || || || || ||||||||
Sbjct 2213925 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || |||||||| | ||||| |
Sbjct 2213877 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA 2213818
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || ||| |||| | | |||||| || ||||| |||||||||||
Sbjct 2213817 TCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTA 2213758
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||| | | |||| |||||| | ||| || || | ||| |
Sbjct 2213757 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 2213698
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| |||| || || || || ||||||||
Sbjct 2213697 GTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2213663
>seq2669
Length=6508339
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAA---TATTGTAATCGCCCATCGTGCGAGAATC 126960
||| || || | || ||||| || |||| ||||||| || || |||| |||
Sbjct 4562103 CACTAAGTGCAGGGTGGACTCCTTCTGAAGAATATTGTAGTCTGACAGAGTGCAGCCATC 4562044
Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020
||||||||||| || | | |||| |||||||||| || || ||||||||||||||
Sbjct 4562043 CTCTAGCTGTTTGCCCACAAAAATCAGATGCTGCTGATCAGGTGGGATGCCCTCCTTGTC 4561984
Query 127021 CGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080
| |||||| |||| | || |||||| | ||| || |||| ||| | ||
Sbjct 4561983 CTGGATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCGAGGGTGATGGT 4561924
Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| ||||| || || ||||| ||||||||
Sbjct 4561923 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 4561891
>seq4088
Length=12000580
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
|| || | ||| |||| | || |||||||| |||| || |||||| || || ||
Sbjct 9606399 AAACGAAGCACTGAATGCAAGGTGGACTCTTTCTGAACATCGTAATCTGACAGAGTACGG 9606458
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
||| || |||||||| || | | | |||| ||||||| || || || |||||||||
Sbjct 9606459 CCATCCTCCAGCTGTTTCCCCGTGAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCC 9606518
Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075
||||| |||| | |||| | | |||||| || ||| || |||| |||
Sbjct 9606519 TTGTCTTAGATTGTAGCTTTGACATTCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTG 9606578
Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || ||||| ||||| || || ||||| ||||| ||
Sbjct 9606579 ATAGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGTAT 9606616
>seq3552
Length=199577
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | || |||||||| ||||||||||| || |||||| ||| ||
Sbjct 80756 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTC 80815
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||||| | || | |||| ||||||| || || || ||||||||||||||
Sbjct 80816 CAGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 80875
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
|||||| |||| | || |||||| | ||| || || | ||| | || ||
Sbjct 80876 GATTTTAGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 80935
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| |||| || || ||||| | ||||||
Sbjct 80936 GCCCATCAGGGTCTTCACAAAGACCTGCAT 80965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475290063989200
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