Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq459 149 1e-30
seq8041 122 2e-22
>seq459
Length=3563100
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || ||||||||||| |||| |||||| |||| | ||| | |||||
Sbjct 2214103 CAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 2214044
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||||||||| | ||||||||| ||| || ||||| ||
Sbjct 2214043 TTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATC 2213984
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| |||| |||||| | | || || |||| ||||| ||
Sbjct 2213983 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGT 2213924
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || ||||| || || ||
Sbjct 2213923 CTTGCCGGTCAGGGTCTTCACGAAGATCTG 2213894
Score = 141 bits (156), Expect = 2e-28
Identities = 163/219 (74%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || ||||||||||| |||| |||||| |||| | ||| | |||||
Sbjct 2213875 CAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 2213816
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || ||||||||||| | ||||||||| ||| || || || ||
Sbjct 2213815 TTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATC 2213756
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| |||| |||||| | | || || |||| ||||| ||
Sbjct 2213755 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 2213696
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| ||||| | || ||||| || || || ||||||
Sbjct 2213695 CTTGCCCGTCAAGGTCTTCACGAAGATCTG---CATTTT 2213660
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 2214330 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 2214271
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || ||||||||||| | ||||||||| ||| || || || |||
Sbjct 2214270 TCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 2214211
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 2214210 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2214151
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 2214150 TTGCCGGTCAGGGTCTTCACGAAGATCTG 2214122
>seq8041
Length=9355897
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || |||||||| |||| ||||||||||| || || | |||||
Sbjct 8398757 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8398816
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 8398817 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8398876
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8398877 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8398936
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| | || ||||| || || ||
Sbjct 8398937 CTTACCCGTCAAGGTCTTCACGAAGATCTG 8398966
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || ||||| || |||| ||||||||||| || || | |||||
Sbjct 8398985 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399044
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 8399045 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399104
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8399105 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399164
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| | || ||||| || || ||
Sbjct 8399165 CTTACCCGTCAAGGTCTTCACGAAGATCTG 8399194
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || ||||| || |||| ||||||||||| || || | |||||
Sbjct 8399213 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399272
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 8399273 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399332
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8399333 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399392
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| | || ||||| || || ||
Sbjct 8399393 CTTACCCGTCAAGGTCTTCACGAAGATCTG 8399422
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || ||||| || |||| ||||||||||| || || | |||||
Sbjct 8399441 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399500
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 8399501 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399560
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8399561 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399620
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| | || ||||| || || ||
Sbjct 8399621 CTTACCCGTCAAGGTCTTCACGAAGATCTG 8399650
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || ||||| || |||| ||||||||||| || || | |||||
Sbjct 8399669 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8399728
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 8399729 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8399788
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8399789 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8399848
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| | || ||||| || || ||
Sbjct 8399849 CTTACCCGTCAAGGTCTTCACGAAGATCTG 8399878
Score = 113 bits (124), Expect = 1e-19
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| | ||| ||||| || ||||| |||| ||||||||||| || || | |||||
Sbjct 8398529 CAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 8398588
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || || || ||||| | | ||||||||| || || || || ||
Sbjct 8398589 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 8398648
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 8398649 TTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 8398708
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||| | || ||||| || || ||
Sbjct 8398709 CTTACCCGTCAAGGTCTTCACGAAGATCTG 8398738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178386054600485
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