Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq5769 120 1e-21
seq4676 113 2e-19
seq4562 100 1e-15
>seq5769
Length=1171468
Score = 120 bits (132), Expect = 1e-21
Identities = 338/516 (66%), Gaps = 5/516 (1%)
Strand=Plus/Plus
Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150
||||| || | |||||| |||||| | |||||| | | | | ||||| | || |||
Sbjct 307266 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGCAA 307325
Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210
||| | ||| | | ||| | | ||| | ||| || ||| |||||| | |
Sbjct 307326 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAATG 307385
Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270
|| || ||||| || | ||| |||| ||||| ||||| || |||||||| ||
Sbjct 307386 GTGTCCTACAAAGGGGAGAAAAAAGCTTTCTACCCTGAGGAAATCTCTTCTATGGTACTG 307445
Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC-CAGTTACTGATGCAGTAAT 451329
||||| ||||| || || || || | | |||| | | | || || |||| || ||
Sbjct 307446 ACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCCACACTGTCACCAATGCTGTGAT 307504
Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389
|| || || || ||||||||||| | || || || || || || |||||||| ||
Sbjct 307505 CACCGTGCCAGCCTATTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCAGGTGTGAT 307564
Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||| ||| | || || || ||||||| || ||||| ||||| ||||| | || |||||
Sbjct 307565 TGCAGGTCTCAACGTGCTAAGAATTATCAACGAACCCACAGCTGCTGCCATTGCTTATGG 307624
Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509
||| ||| | || | ||| | | | || | |||||| | ||||||||
Sbjct 307625 CTTAGATAAAGC---AGGTCAGGGAGAGCGACACGTCCTAATCTTTGATCTGGGTGGAGG 307681
Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569
|| |||| || | || | || || || ||| | ||||| || ||||| ||
Sbjct 307682 CACATTTGATGTGTCCATCCTGACCATAGATGACGGGATTTTTGAGGTGAAGGCCACGGC 307741
Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| || || || || || || || || |||| ||
Sbjct 307742 TGGGGACACGCACCTGGGTGGGGAGGACTTTGACAA 307777
>seq4676
Length=6134593
Score = 113 bits (124), Expect = 2e-19
Identities = 237/353 (67%), Gaps = 3/353 (1%)
Strand=Plus/Minus
Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267
|| ||||| || || || || || |||| || ||| || || | ||||| |||||
Sbjct 4175133 CAGGTAAAATACAAGGGAGAGACAAAAAGCTTGTATCCAGAGGAGGTGTCATCCGTGGTT 4175074
Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327
| || || ||| | ||||| |||||| || |||| | ||||| |||| |
Sbjct 4175073 TTGACAAAGATGGAGGAAACTGCAGAAGCCTACCTTGGGAAGACTGTTACCAATGCTGAT 4175014
Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387
| || || ||| ||||||||||||| | || | || || || |||||||| ||| |
Sbjct 4175013 GTCACAGTACCCACTTATTTCAATGACTCTCAGCATCAGGCTACCAAAGATGCTGGAACT 4174954
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
||||||||| | || || ||| |||| |||||||| || || || |||||| | || ||
Sbjct 4174953 ATTGCTGGTCTCAAAGTACTTAGAATCATTAATGAGCCAACTGCTGCTGCTATTGCTAAT 4174894
Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507
|| ||| | ||| | || |||| |||| | | | ||||| || |||||
Sbjct 4174893 GGCTTAG---ACGAAAAGGTTGGAGCTGAAAGAAATGTGCTGATCTTTGACTTGGGTGGT 4174837
Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560
|| ||| |||| || ||| | ||||| ||||| | ||||| || ||
Sbjct 4174836 GGCACTTTTGATGTGTCAACCCTTACTATTGAGGATGGAATCTTTGATGTCAA 4174784
>seq4562
Length=4329500
Score = 100 bits (110), Expect = 1e-15
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| ||||||| ||||||| || ||||||||||| ||||| ||||| || |||||
Sbjct 1616102 GTTACTCATGCAGTTGTTACTGTACCTGCTTATTTCAACGATGCCCAACGCCAGGCAACC 1616161
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
||||| || ||| ||||||||| || |||||| | | || || ||||| ||
Sbjct 1616162 AAAGACGCTGGAACTATTGCTGGATTGAATGTTATGAGGATCATCAATGAGCC 1616214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974820895959140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |