Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq459 143 6e-29
seq8041 141 2e-28
seq3552 109 1e-18
seq4088 96.9 8e-15
seq8358 93.3 9e-14
>seq459
Length=3563100
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || |||||||| | |||||| | ||||||||
Sbjct 2214099 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 2214040
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| ||||||||||| || | || ||||| ||||| |||||||| || || ||
Sbjct 2214039 AGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 2213980
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| |||||||| |||||||| | ||||| || ||||| | |||||
Sbjct 2213979 ATCTTGGCCTTCACGTTCTCGATGGTGTCGCTAGGCTCCACCTCCAGGGTGATGGTCTTG 2213920
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | |||||
Sbjct 2213919 CCGGTCAGGGTCTTCACGAAGATCTGCAT 2213891
Score = 140 bits (154), Expect = 7e-28
Identities = 160/214 (75%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || |||||||| | |||||| | ||||||||
Sbjct 2213871 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 2213812
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| ||||||||||| || | || ||||| ||||| ||||| || || || ||
Sbjct 2213811 AGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGG 2213752
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || ||||| |||||||| ||| ||||| || ||||| | |||
Sbjct 2213751 ATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 2213695
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || ||||| || || ||||| | |||||||
Sbjct 2213694 TTGCCCGTCAAGGTCTTCACGAAGATCTGCATTT 2213661
Score = 136 bits (150), Expect = 9e-27
Identities = 158/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || |||||||| || || |||||||| | |||||| | ||||||||
Sbjct 2214327 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 2214268
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| ||||||||||| || | || ||||| ||||| ||||| || || || ||
Sbjct 2214267 AGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGG 2214208
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || ||||| |||||||| ||| ||||| || ||||| | |||
Sbjct 2214207 ATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 2214151
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || ||||| | |||||
Sbjct 2214150 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 2214119
>seq8041
Length=9355897
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || ||||||||||| || || ||||| || | || ||
Sbjct 8398976 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 8399035
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 8399036 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 8399095
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 8399096 CTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 8399152
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 8399153 CAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || ||||||||||| || || ||||| || | || ||
Sbjct 8399204 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 8399263
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 8399264 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 8399323
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 8399324 CTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 8399380
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 8399381 CAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || ||||||||||| || || ||||| || | || ||
Sbjct 8399432 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 8399491
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 8399492 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 8399551
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 8399552 CTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 8399608
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 8399609 CAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || ||||||||||| || || ||||| || | || ||
Sbjct 8399660 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 8399719
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 8399720 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 8399779
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 8399780 CTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 8399836
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 8399837 CAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 136 bits (150), Expect = 9e-27
Identities = 166/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || ||||| || |||||||| || || || ||||| || | || ||
Sbjct 8398748 TCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 8398807
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 8398808 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCC 8398867
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 8398868 CTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 8398924
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 8398925 CAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
Score = 127 bits (140), Expect = 5e-24
Identities = 153/207 (74%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||| || || || || ||||| || | || || | ||||||||| |||||
Sbjct 8398538 GTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTG 8398597
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || ||||| | | || |||||||| || ||||| || |||||||| || ||
Sbjct 8398598 TTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTT 8398657
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
|||||||||||| |||||||| ||| ||||| || ||||| | ||||| ||
Sbjct 8398658 CGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTACC 8398714
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || || ||||| | |||||
Sbjct 8398715 CGTCAAGGTCTTCACGAAGATCTGCAT 8398741
>seq3552
Length=199577
Score = 109 bits (120), Expect = 1e-18
Identities = 149/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| ||||||||||| || | |||| | ||||| || |||||
Sbjct 80762 GTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTCCAGCTG 80821
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| | || || || || | || ||||| || || ||||| || |||||||| |||||
Sbjct 80822 TTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTT 80881
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||| |||||| ||||||| ||| || || |||||||| | ||||| ||
Sbjct 80882 AGCTTTGACATTCTCAGTGGTGTC---ACTGGGCTCAACCTCAAGGGTGATGGTCTTGCC 80938
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || || || || || |||||
Sbjct 80939 CATCAGGGTCTTCACAAAGACCTGCAT 80965
>seq4088
Length=12000580
Score = 96.9 bits (106), Expect = 8e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||||||||| |||| || |||||| | ||||| | ||||| || ||||| || ||
Sbjct 9606420 GTGGACTCTTTCTGAACATCGTAATCTGACAGAGTACGGCCATCCTCCAGCTGTTTCCCC 9606479
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
| ||| || || | || ||||| || || ||||| || ||||||| ||| | |||
Sbjct 9606480 GTGAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTAGATTGTAGCTTTG 9606539
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| |||| | ||||||| | || || || ||||| | ||||| ||||||| ||
Sbjct 9606540 ACATTCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTGATAGTCTTGCCTGTCAGGGTC 9606599
Query 195124 TTTACGAA 195131
|| || ||
Sbjct 9606600 TTCACAAA 9606607
>seq8358
Length=16791372
Score = 93.3 bits (102), Expect = 9e-14
Identities = 101/134 (75%), Gaps = 4/134 (3%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || ||||| |
Sbjct 2262999 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AGAGTACGT 2262944
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
| ||||| | ||||| | || |||||| ||| ||| || | ||| |||| |||||
Sbjct 2262943 CTGTCTTCTGGTTGCTTCCTAGCAAAGATAGGTCTTTGCTGATTGGGAAGAATTCCTTCC 2262884
Query 195043 TTGTCTTGAATTTT 195056
|| ||||| || ||
Sbjct 2262883 TTATCTTGGATGTT 2262870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108977598913985
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