Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 134 9e-27
seq3552 105 4e-18
seq459 93.3 3e-14
seq2669 91.5 1e-13
seq1683 86.0 4e-12
seq1720 84.2 1e-11
seq4088 82.4 5e-11
>seq8041
Length=9355897
Score = 134 bits (148), Expect = 9e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||| || | || |||||||| | ||| ||| ||||| ||||| ||||| ||
Sbjct 8398515 CCTCCCCTTAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 8398574
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| ||||||||||| || ||||| || | | ||||||||| | ||
Sbjct 8398575 AGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 8398634
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| |||||| |||||| | || | |||| || ||| ||
Sbjct 8398635 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 8398694
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || ||||| | |||||||| |||||||||||
Sbjct 8398695 TCCAGGGTGATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 8398741
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 8398989 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 8399048
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 8399049 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 8399108
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 8399109 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 8399168
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 8399169 CCCGTCAAGGTCTTCACGAAGATCTGCAT 8399197
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 8399217 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 8399276
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 8399277 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 8399336
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 8399337 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 8399396
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 8399397 CCCGTCAAGGTCTTCACGAAGATCTGCAT 8399425
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 8399445 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 8399504
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 8399505 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 8399564
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 8399565 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 8399624
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 8399625 CCCGTCAAGGTCTTCACGAAGATCTGCAT 8399653
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 8399673 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 8399732
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 8399733 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 8399792
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 8399793 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 8399852
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 8399853 CCCGTCAAGGTCTTCACGAAGATCTGCAT 8399881
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 8398761 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 8398820
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | ||||||||| | || | |||||||||||
Sbjct 8398821 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 8398880
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 8398881 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 8398940
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| | |||||||| |||||||||||
Sbjct 8398941 CCCGTCAAGGTCTTCACGAAGATCTGCAT 8398969
>seq3552
Length=199577
Score = 105 bits (116), Expect = 4e-18
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| ||||||||||| || ||||| || | | || |||| |||
Sbjct 80757 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGATGGAGTGCGACCATCCTCC 80816
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| | ||||| || || | |||||||| | || | |||||||||||
Sbjct 80817 AGCTGTTTGCTCGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 80876
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || |||||| || || | | |||| || |||||| || | ||| ||||| |
Sbjct 80877 ATTTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCT 80934
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||| | || ||||||||||||| ||||||
Sbjct 80935 TGCCCATCAGGGTCTTCACAAAGACCTGCAT 80965
>seq459
Length=3563100
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| ||||| || || ||||| | || |||| |||||||| || || || ||
Sbjct 2214309 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAG 2214250
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | |||||||| || ||||| || || ||
Sbjct 2214249 ATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--AT 2214192
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || ||| || || | ||| ||||| || || || || |||||||
Sbjct 2214191 TCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 2214132
Query 34969 CAAAGATCTGCATA 34982
| ||||||||||||
Sbjct 2214131 CGAAGATCTGCATA 2214118
Score = 89.7 bits (98), Expect = 3e-13
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || |||| ||| | || || ||||| ||||| || || |||
Sbjct 2213889 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAA 2213830
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| |||||||| || || || || || || | |||||||| | ||
Sbjct 2213829 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 2213770
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| |||||||| || ||||| || || || || || | |||| || ||| |
Sbjct 2213769 ATGCCCTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 2213712
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| || | ||| ||||| || ||||| | |||||||| ||||||||||| ||
Sbjct 2213711 CCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATTTT 2213660
>seq2669
Length=6508339
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/186 (72%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 34798 GAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTC 34857
|||| || ||||| || || | | |||| || |||||||| || |||| || ||
Sbjct 4562074 GAATATTGTAGTCTGACAGAGTGCAGCCATCCTCTAGCTGTTTGCCCACAAAAATCAGAT 4562015
Query 34858 GTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTA--T 34915
| ||||| || | || | ||||||||||| || || |||||| || || |
Sbjct 4562014 GCTGCTGATCAGGTGGGATGCCCTCCTTGTCCTGGATTTTAGCTTTGAC--ATTCTCAGT 4561957
Query 34916 CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGAT 34975
| |||| || |||||| |||| ||| ||||| || ||||| || ||||||||||||||
Sbjct 4561956 GGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGAT 4561897
Query 34976 CTGCAT 34981
||||||
Sbjct 4561896 CTGCAT 4561891
>seq1683
Length=8760594
Score = 86.0 bits (94), Expect = 4e-12
Identities = 115/157 (73%), Gaps = 5/157 (3%)
Strand=Plus/Plus
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| ||||||||||| || ||||| || || | |||||||| |||| | |||||||||
Sbjct 1155971 TCCTCCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGGATGCCCTCCTTG 1156030
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTA 34944
|| | || |||||| || || | | |||| || |||||| ||| ||| |
Sbjct 1156031 TCTTGGGTTTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCAAC-CCGAGGGTGA 1156087
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || ||||| || ||||||||||||||||||||
Sbjct 1156088 TGGCCTTGCCCGTTAGGGTCTTCACAAAGATCTGCAT 1156124
>seq1720
Length=6396105
Score = 84.2 bits (92), Expect = 1e-11
Identities = 132/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
|||||||| || ||||| || || | || | ||||||||||||| || || || |
Sbjct 3282196 TTCTGAATATTCTAGTCTGACGGGGTGCGGCCCTCATCCAGCTGTTCGCCCGCGAAACTC 3282255
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || |||||||| | || | ||||||||||| | || || | |||| || ||
Sbjct 3282256 AGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTTGATTTTAGCTCTGAC--ATTCT 3282313
Query 34914 --ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971
| | |||| || |||||| |||| ||| | ||| || ||| | || |||||||||
Sbjct 3282314 CAGTGGTGTCACAGGGCTCAACCTCGAGGGTGAGGGTCTTGCCCATCAGGCTCTTCACAA 3282373
Query 34972 AGATCTG 34978
||| |||
Sbjct 3282374 AGACCTG 3282380
>seq4088
Length=12000580
Score = 82.4 bits (90), Expect = 5e-11
Identities = 136/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||| | || || || || | || |||| ||||||||||| || | ||
Sbjct 9606426 TCTTTCTGAACATCGTAATCTGACAGAGTACGGCCATCCTCCAGCTGTTTCCCCGTGAAA 9606485
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||||||||| || | |||||| ||
Sbjct 9606486 ATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTAGATTGTAGCTTTGAC--AT 9606543
Query 34911 GCT-ATCGAT-TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | | ||| || |||||| |||| ||| || || || || || || |||||||
Sbjct 9606544 TCTTATTGGTGTCAGTGGACTCAACCTCGAGGGTGATAGTCTTGCCTGTCAGGGTCTTCA 9606603
Query 34969 CAAAGATCTGCAT 34981
|||||||||| ||
Sbjct 9606604 CAAAGATCTGTAT 9606616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324493323285240
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