Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3956 172 1e-37
seq35440 123 5e-23
seq5108 93.3 8e-14
>seq3956
Length=2629880
Score = 172 bits (190), Expect = 1e-37
Identities = 184/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444
||| |||| ||||| | || | ||| || ||||| ||||||||| |||||||||||
Sbjct 1281337 AGCAGCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 1281396
Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504
||||| || | | || || ||||||| || ||||| || | |||||| ||||||
Sbjct 1281397 TCCCGGAGGAGGCCGGCAGTGCTGGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCACC 1281456
Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564
|| |||||||| |||||||| || ||||| || ||| ||||| || ||||| ||||
Sbjct 1281457 TTGTCCTCCAGGCGCGCGATACGCTCCAGCTTCCGCTTCCGGCACTTAGTGGCCGCCAGC 1281516
Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
|||||||| || | ||| || || | |||||||| |||||||| ||||||| ||| ||
Sbjct 1281517 CGGTTCCGCAGCCGCTTGCGCTCTACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGG 1281576
Query 241625 GAC 241627
|||
Sbjct 1281577 GAC 1281579
>seq35440
Length=12707973
Score = 123 bits (136), Expect = 5e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 241430 AGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGAC 241489
|| || |||||||| || ||||| | | ||| || | ||| | | ||| | |
Sbjct 1528523 AGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGCTCCGTGTTCTGGCTC 1528582
Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549
|||||| ||||||||| ||||| || |||| |||||| ||||| |||||| ||||||
Sbjct 1528583 TTGAGCGTCTTCACTTTTTCCTCGAGGCGCGAGATGCGCTCCAGCTTGCGCTTGCGGCAC 1528642
Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609
|||| ||| || | |||||| || || | ||| || |||||||| ||||| |||||
Sbjct 1528643 TTGGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTAATGCGCTCCTGCGTG 1528702
Query 241610 TCCATGTCGATCGGAGAC 241627
||||||||||| || |||
Sbjct 1528703 TCCATGTCGATAGGCGAC 1528720
>seq5108
Length=3340571
Score = 93.3 bits (102), Expect = 8e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||| ||||| | ||||| || | ||||| |||| |||
Sbjct 3166919 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCG 3166978
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | ||||||||||| || |||||| ||||||||||
Sbjct 3166979 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 3167038
Query 241619 ATCGGAGAC 241627
|| || |||
Sbjct 3167039 ATGGGGGAC 3167047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931119956307200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |