Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23]
35,455 sequences; 1,992,663,268 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq8041 125 6e-24
seq4088 95.1 1e-14
seq2669 91.5 1e-13
seq459 91.5 1e-13
seq3552 86.0 6e-12
>seq8041
Length=9355897
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| || || || || || || || |||
Sbjct 8398741 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 8398682
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 8398681 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 8398622
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| |||||||||||||| ||| | | | | |||| || || |||
Sbjct 8398621 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 8398562
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || |||||||| |||| || | |||||
Sbjct 8398561 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCTTAAGGGGAGG 8398515
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| || || || || || || || |||
Sbjct 8398969 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 8398910
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 8398909 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 8398850
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 8398849 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 8398790
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| |||| ||||
Sbjct 8398789 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 8398755
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| || || || || || || || |||
Sbjct 8399197 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 8399138
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 8399137 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 8399078
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 8399077 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 8399018
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || || || || ||| |||| ||||
Sbjct 8399017 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 8398983
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| || || || || || || || |||
Sbjct 8399425 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 8399366
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 8399365 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 8399306
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 8399305 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 8399246
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || || || || ||| |||| ||||
Sbjct 8399245 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 8399211
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| || || || || || || || |||
Sbjct 8399653 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 8399594
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 8399593 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 8399534
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 8399533 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 8399474
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || || || || ||| |||| ||||
Sbjct 8399473 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 8399439
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| || || || || || || || |||
Sbjct 8399881 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 8399822
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 8399821 GACACCATCGAGAACGTCAAGGCGAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 8399762
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 8399761 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 8399702
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || || || || ||| |||| ||||
Sbjct 8399701 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCG 8399667
>seq4088
Length=12000580
Score = 95.1 bits (104), Expect = 1e-14
Identities = 167/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||| ||||||||| | || || || || || || ||||| || ||||| || || ||||
Sbjct 9606617 GATACAGATCTTTGTGAAGACCCTGACAGGCAAGACTATCACCCTCGAGGTTGAGTCCAC 9606558
Query 24763 CGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | ||| | | | ||| ||||||| || || || || || || |
Sbjct 9606557 TGACACCAATAAGAATGTCAAAGCTACA-ATCTAAGACAAGGAGGGCATCCCACCTGACC 9606499
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | | |||| || | |||||||||||||||||| | | ||||||||||
Sbjct 9606498 AGCAGCATCTGATTTTCACGGGGAAACAGCTGGAGGATGGCCGTACTCTGTCAGATTACG 9606439
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941
| |||| || || || || | || | ||| | || ||| | || ||| |||||||
Sbjct 9606438 ATGTTCAGAAAGAGTCCACCTTGCATTCAGTGCTTCGTTTGGGAGGCGGCATCACTGAGC 9606379
Query 24942 C 24942
|
Sbjct 9606378 C 9606378
>seq2669
Length=6508339
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/214 (70%), Gaps = 3/214 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || ||||| || || |||
Sbjct 4561890 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTTGAGCCCAG 4561949
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || ||| || ||||| ||||| || || || || || |||||
Sbjct 4561950 TGACACCACTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAGGGCATCCCACCTGATCA 4562009
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||| |||| || |||||||| |||||| | | ||||||| || ||
Sbjct 4562010 GCAGCATCTGATTTTTGTGGGCAAACAGCTAGAGGATGGCTGCACTCTGTCAGACTACAA 4562069
Query 24883 CA---TTCAAAAGGAATCGACACTACACTTGGTG 24913
| |||| ||||| || || || ||||| |||
Sbjct 4562070 TATTCTTCAGAAGGAGTCCACCCTGCACTTAGTG 4562103
>seq459
Length=3563100
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || | | |
Sbjct 2213891 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCTAGC 2213950
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || ||||| || ||||| || ||
Sbjct 2213951 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 2214010
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| || || || |||||||| ||| | | | || ||||| |||
Sbjct 2214011 CAGAGGCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 2214070
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| ||||| || ||| |||| ||||
Sbjct 2214071 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCG 2214105
>seq3552
Length=199577
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||| ||||| | || || || | || || || || || || || || || |||
Sbjct 80966 GATGCAGGTCTTTGTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 80907
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || ||| || ||||||||||| || || || || || || ||
Sbjct 80906 TGACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 80847
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
|| | | |||| ||||| | ||||||||||||||| ||| || ||||| ||
Sbjct 80846 GCAGCATCTGATTTTTGCGAGCAAACAGCTGGAGGATGGTCGCACTCCA--TCAGACTAC 80789
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| ||||| || || || || || |||||||||
Sbjct 80788 AATATTCAGAAAGAGTCCACCCTGCACTTGGTG 80756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449698211007400
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